Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4471 ATGGAACTACAGGGATGTAAAGCCATGAAATATTTTCCTCTTATTTTTGTTCTTACTAAGATTCTGTTGTTCTTTTCTTTTACCTCCAGTGCAGCTGACTCCATATCCCAATCTCAATCACTTTCTGAAGGCAAGACCTTAGTTTCTGCAGATGGAAGCTTTGAATTTGGTTTCTTCAGCCCAGGAAGTTCGGCAAACCGGTTCTTGGGAATATGGTACAAGGCAATACCAGTTAAGACTGTTGTCTGGGTTGCCAACCGATCCAACCCTGTGAAAGACAACTCTAGTATGTTACATATCAACAGTGAGGGCAATCCTGTGCTTGTTAACAACAATGGAACTCTGATTTGGTCAGCAGAGTCAAGAAAGAAGGCTCTCAATCCCATTGTTCAGCTCTTAAATTCAGGGAATTTAGTTTTGAGGGATGAAAGAGATGAAGATCCTCAAAACTACTTGTGGCAGAGCTTTGATTATCCTTGTGGTACACTCTTACCAGGAATGAAACTGGGTTGGGACTTGAAGACTGATCTTGATAGGCGTGTATCGGCTTGGAAGAATTGGGATGATCCATCGCCTGGTGATTTCAAATGGGGTATCTCACTTGAAGGTGTTCCTCAAGTAATGATGTGGAAGGGCTCACAAGAATACTACCGTGGCGGTATATGGAATGGCCTTGGATTCAGTGGCGCGCCAGAACTGAAGAACAATCCACTTTTTGAGTTTGAATTTGTCTCCAACAAGGATGAGGTGTACTACACATACAGCCTCAGGAATAAGTCTATGATTTCAAGGGTTGTTCTGAACCAAACCAGTTATACTCGCCAGAGGTACATATGGATCCAAGAGGCTAAAACTTGGAGAATTTATGCATCAGTGCCTAGAGATAACTGTGATTTCTACAATCTTTGTGGACCATATGGAAATTGCATCATAGGCGACTCGCCAGTGTGCCAATGTTTAACAGGGTTTATGCCAAGATCACAAAAAAATTGGGACAATATGGACTGGACTGAAGGATGTTTACTCACTCAACAATGGAGCTGCAAGGATAAGAGCCAAAATGGGTTTTTGAAATTTAGTGGGGTGAAATATCCAGATACTTCTCATTCTTGGGTCAATGAGAGGATGAATACCAATGAATGCAGGGGTAAATGCTTGGAGAACTGTTCCTGTAAAGCTTATGCAAATTCAGATGTTCGAAATGGAGGCAGTGGCTGCTTGTTGTGGTTTGGTGATCTCAGGGATATTAGACAATTTTCTGGTGGTGTTCAGGACCTGTATATTCGGACTAAAATATCAGAGTTAGGGGTGAAAAGGGAACATAACATTAAGGTGGTGGCAATAATCACCATTGCAGCCGCTGTTTTTATGGTGATTCTGGGTTTGTTGTACTATGTTTGCAAGAGGATGAAGAAGTCCAGAGTTGATGAAACAGAGGACACCTTGAGGGTACAGAATAACGAAGAAAGCGAGAATGAAGACTTGCAGCTTCCTTTCTTTGACCTTGCTGTGATTGCCAAAGCAACTGATGGCTTCTCAATTAACAATAAGCTTGGAGAAGGTGGATTTGGAGTAGTATACAGGGGTACCCTAGCAGATGGACAAGAAATTGCTGTGAAGAGGCTCTCACAAAGTTCTGGGCAAGGCTTCAATGAATTTAAGAATGAAGTCATATTGATTGCGAAACTTCAGCATCGAAACCTGGTTAAGCTTCTTGGTTGTTGCATTCAAGGAGAGGAGAAAATGCTTATCTATGAATACATGCCCAACAAAAGCCTGGACTTCTTTATCTTCGATCATGCAAAAGGTGAAGTTTTGGATTGGCCTAAACGCTTCAACATTATATGTGGAATATCCCGAGGACTTGTGTATCTTCATCAAGATTCTAGGTTGAGAATAATACACAGAGACCTTAAAGCAAGTAATGTCTTACTTGACAGTGAGTTGAACCCAAAAATATCCGATTTTGGTTTGGCTAGAACTTTTGGAGGAAATCAGACTGAAGGAAACACGAGGAGGGTGGTCGGGACATATGGTTATATGGCACCTGAATACGCGATTCATGGCCTATTCTCAGTAAAATCTGATGTCTTCAGCTTCGGTGTAATATTGCTGGAGATAGTAACTGGAAAGAAGAACAGAGGGTTTTCTCATTCAAGTAACAGTATAGACCTTATTGGACATGCATGGAGATTTTGGAAAGAGAACAAACCCTTGGATTTGATCGATCCGCGCATGGAGAAATATTCATCTGATCTATCAGAAGCATTGCGTTGCATCCATATCAGTCTTCTCTGTGTTCAACAACATCCTGAGGATAGGCCAAACATGTCAACTGTGGTTGTGATGTTGAGCAGCGAGAGTGCCTTGCCTCAACCCAAGGAACCTGCTTTCCTTATTGACAAGTCCTTTCTTGAAGCTGATTCCTCCACCAAGCATCCATCTTCTTCAACCAATGAAATAAGTGTTACCATGTTAGAGCCCCGGTAG 2490 0.4189 MELQGCKAMKYFPLIFVLTKILLFFSFTSSAADSISQSQSLSEGKTLVSADGSFEFGFFSPGSSANRFLGIWYKAIPVKTVVWVANRSNPVKDNSSMLHINSEGNPVLVNNNGTLIWSAESRKKALNPIVQLLNSGNLVLRDERDEDPQNYLWQSFDYPCGTLLPGMKLGWDLKTDLDRRVSAWKNWDDPSPGDFKWGISLEGVPQVMMWKGSQEYYRGGIWNGLGFSGAPELKNNPLFEFEFVSNKDEVYYTYSLRNKSMISRVVLNQTSYTRQRYIWIQEAKTWRIYASVPRDNCDFYNLCGPYGNCIIGDSPVCQCLTGFMPRSQKNWDNMDWTEGCLLTQQWSCKDKSQNGFLKFSGVKYPDTSHSWVNERMNTNECRGKCLENCSCKAYANSDVRNGGSGCLLWFGDLRDIRQFSGGVQDLYIRTKISELGVKREHNIKVVAIITIAAAVFMVILGLLYYVCKRMKKSRVDETEDTLRVQNNEESENEDLQLPFFDLAVIAKATDGFSINNKLGEGGFGVVYRGTLADGQEIAVKRLSQSSGQGFNEFKNEVILIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDFFIFDHAKGEVLDWPKRFNIICGISRGLVYLHQDSRLRIIHRDLKASNVLLDSELNPKISDFGLARTFGGNQTEGNTRRVVGTYGYMAPEYAIHGLFSVKSDVFSFGVILLEIVTGKKNRGFSHSSNSIDLIGHAWRFWKENKPLDLIDPRMEKYSSDLSEALRCIHISLLCVQQHPEDRPNMSTVVVMLSSESALPQPKEPAFLIDKSFLEADSSTKHPSSSTNEISVTMLEPR* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4471 829 CDD B_lectin 38 159 IPR001480 -
Lja3g4471 829 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Lja3g4471 829 CDD STKc_IRAK 518 784 - -
Lja3g4471 829 ProSiteProfiles Protein kinase domain profile. 512 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4471 829 Pfam S-locus glycoprotein domain 217 326 IPR000858 GO:0048544
Lja3g4471 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 190 IPR036426 -
Lja3g4471 829 Gene3D Transferase(Phosphotransferase) domain 1 588 795 - -
Lja3g4471 829 SMART blect_4 38 159 IPR001480 -
Lja3g4471 829 Pfam D-mannose binding lectin 80 185 IPR001480 -
Lja3g4471 829 ProSiteProfiles Bulb-type lectin domain profile. 32 153 IPR001480 -
Lja3g4471 829 PIRSF SRK 6 829 IPR024171 GO:0004674
Lja3g4471 829 ProSiteProfiles PAN/Apple domain profile. 348 431 IPR003609 -
Lja3g4471 829 MobiDBLite consensus disorder prediction 808 829 - -
Lja3g4471 829 PANTHER - 31 826 - -
Lja3g4471 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Lja3g4471 829 CDD PAN_AP_plant 347 430 - -
Lja3g4471 829 SUPERFAMILY Protein kinase-like (PK-like) 498 817 IPR011009 -
Lja3g4471 829 SMART ntp_6 351 430 IPR003609 -
Lja3g4471 829 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 826 - -
Lja3g4471 829 Pfam PAN-like domain 348 416 IPR003609 -
Lja3g4471 829 MobiDBLite consensus disorder prediction 809 829 - -
Lja3g4471 829 Gene3D - 25 156 IPR036426 -
Lja3g4471 829 Pfam Protein tyrosine and serine/threonine kinase 513 783 IPR001245 GO:0004672|GO:0006468
Lja3g4471 829 Gene3D Phosphorylase Kinase; domain 1 471 587 - -
Lja3g4471 829 SMART serkin_6 512 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4471 829 Pfam Domain of unknown function (DUF3403) 785 829 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4471 Lja-Chr3 86335910 86340146 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4471 442 798 Receptor kinase-like Gene Family AT4G23230 56.825 1.32e-134 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g4471 PK_Tyr_Ser-Thr 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4471 - - qsu:112024700 1106.28