Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4462 ATGGATCAAAACCTGTTCCAACTTTCCATGTTTACTCTTACAATAATCAGTTTTCGATTTCTCTTTGCAGTAGTGGCAAAGGATCAAAACATTTCTGGTATATCAGATGATAACTACTGTAGCAATAATAGAGTCTGCGGAGCCAATTCGAACTGTGATGTTACAAAAGGAACAGCTTGTGTTTGTTTAGATGGATTCAAACTCAAATCAATAAGTGGATGGGATCCTGCGGACTATACACAAGGTTGTGTACGTGATAAAGCATTGAATTGTTCAACAGATCATGTGTTCACCAAATATAGTGTGTACCAAGAGCCTAGTGGCACATTTTATTTGTTAAACCAAAGTTTGACAGAGGAGGATTGCAGAGAGAGATGCTTGAGTAACTGTTCTTGTGTGGCTTTTAGTTTTGGAAGTGGTTGCAAATTATGGAATGGTGATCTATTTGATGTTAGGGGGGTCAAAGAAGGGAAGGATCTGTATATTCGGATGCAAGCTTCAGTGCAAGACCCTGAAGAGGAAACTCATGGGCATAATGAGCGAATCATAGTGGGAGTAATAATCGGGAGTACTATTGCTATAATTTCTGGGATAATCTTTTGTTGCTGTTACTTGCACAGGAGAAGGTCAAGGTTAAGAGGCAACATAAGGACAAGTGAGATGGTTGGTCATATTGATGAAGAAGCAAAAGGGGATCTGGAGCTTCCATTATTTGACCTATCAAGAATAGCTATGGCCACTGATAACTTTTCTGTCAATAACAAGCTTGGAGAAGGTGGATTTGGACCTGTATACAAGGGTACATTACATGATGGGCGACAAATTGCAGTGAAGAGGCTATCAAGGAGTTCAGGGCAGGGGCTGAACGAATTCAAAAATGAAGTAATACTAATAGCCAAGCTTCGGCACCGTAATCTTGTAAAACTTATTGGATGCTGCATCCAAGGGGAAGAGAAGTTGCTGATATATGAATACATGCCTAACAGAAGCCTTGATTATTTTATTTTTGATAAAATTCGAGGGAAACTCTTGGATTGGCCTAAACGCTTTAACATCATATGTGGTATCGCTAGGGGCCTACTATACCTTCATCAAGATTCTAGGCTAAGGATTATACACAGAGATCTAAAAGCAAGTAATGTTTTGCTCGACAATGAGATGGTACCAAAGATCTCAGACTTTGGTTTGGCTAAAAGTTTTGATGGAGGAGATCAGAGTAGAGGAAATACAAATAGAATTATGGGAACTTTTGGATACATGGCCCCGGAATATGCTGTTAACGGACAATTTTCAGTGAAATCTGATGTCTTTAGCTTCGGGATTTTGGTGCTTGAGATAGTAGCTGGGGAAAAAAATAGAAGGCTCTATCAGCCAAATGACGATGTTTACTTATATGGACATGCATGGAGCTTATGGGAACAAGGAAGGCCCTTAGAACTGGTTGATGAATGCCTGAAGAACTCTTGGTCATTGTCTGAAGTGCAGCGCTGCATCCATATTGGCTTACTCTGTGCACAACAGCATCCTCAGGACAGGCCAAGCATGTCATCTGTGGTTCTGATGTTGGGTAGTGAAATTGACTTGCCTCAACCCAAATTTCCTAGTGTTTTCGTAGGAGAACCTTATGATGGCCTAAGTTCCTCCGATAGTAAAAATAAATTGAGCATTACAGATGTTGAACCTAGAATCTCTGGTTTCTTTCCACTTAGTGTTTACCTTGTCTTTCAAACCTCCATAATCTTGGCTGCAACAACTGACACCATTCATGAGTTGCAATCTCTGACTAAAAACCAGACCTTGGTCTCCAAGAATGGAAACTTTGAGCTGGGTTTCTTCACCCCTGGTAACTCTAAGAACCGTTATTTGGGCATTTGGTTCATCCCAGACAAAACCGTTGTTTGGGTTGCAAACAGAGAAAAACCCACAAACCACTCTTCTGTTGTCTTGCAGATAAGCAACACCACCCAAAACATTCTTGTTTTTGATCAGAAGAAGAGTGTCCTATGGTCTGCAACACCTATAAGAAAGGCTAAGAAGAATCCAATTCTGCAACTCTTAGATTCTGGAAATCTTGTCCTGAGAGAGCAACATGATGATAATGATGATGAGAATCCAGAGAATGAAGCTCAAATTCTATGGCAGAGCTTTGACTACCCTTGTGACACACTGTTACCAGGAATGAAACTTGGGAAGGACTTAAGAACCGGTTTTGATCGACGCCTGGTGGCGTGGAAGAACGAAAACGACCCTTCACCTGGGAACTTCTCATGGGGCATGCATGTGACCAATTACCCTGAACCAATGATGTGGATTGGTTCAAGAAAAAGCTTCAACAGCGGTCCGTGGAATGGAGTTCAGTACAGCGGCAAACCAACATCAAGACCGCACCCGGTTTTCGAGTACATTTACTTCTCCAATGAGGAAGAGGTGTACTTCATGTTTAGGCTCTTGAATAGCTCTATCAAAACAGCAAGGATGATGCTGAATCAAACCATCTATGCTCGCGAGAGTTCGGTGTGGGTGGAGGAGGAGCATAGATGGAAGGTGTATGGTTCACTACCAAGGGATTTTTGTGACAAGTATGGTGCTTGTGGTCCTAATGGGAATTGTGATCCTAACAAATTACCTTCTCCTTGTGAATGTTTAAGAGGGTTTAAGCCTAAATCTCTTTTGAGATGGAAGGGAATGGAGTATGCTGAAGGGTGTGTGCGTGATAGACCACTGAGCTGCAAGAATGATGGGTTTTCCAAATATGTTCACATGAAATTGCCTGATACTGAATTTAGTTGGTTGGATCAGAACATGACCCTTTCTGAATGCAGAGCCAAATGCCTGACGAATTGTTCTTGCACGGCGTATACAAACTCGGATATTAGAGGAGAAGGAAGTGGGTGTGCCATGTGGTTTGGTGATCTTAATGACTTGAGGCTTCAACCAGATGCAGGGCAGGATCTGTATGTTCGAGTGCCTGCTTCTGAATTGGATACAGACAATGGACGCAAGGTCAAGGTAGGAATTGCAGTTGGAAGCACCATGGCAGTAATATGTGGCCTGCTTTTGGCTTTCTTTATCAGATGCAGGAGAAGGGCCAACCTGAAAAAGAAACTTGCGGTAAGGGACCTTTTCAAAGAAGAACAGGAAGATGAGGATATGGAGCTTCCATTTTTTGACATGTCAAGTATAGCTAGAGCCACTGACAACTTCTCAATCAGCAACAAGCTCGGAGAAGGTGGTTTTGGACCCGTATACAAGGGAAGGTTGGAAAATGGACAAGAAATTGCAGTCAAGAGACTTTCTAGAGGCTCTGGACAAGGGGTCAAGGAATTCAAAAACGAAATCAAATTGATAGCCAAACTTCAACACCGCAATCTCGTAAGACTTCAAGGATTTTCCATTCAGGATGAAGAGAAGTTGCTAATATATGAATACTTGCCAAACAAAAGCTTGGATTGCTTTATATTTGATCAAACAAAGAGAATGCTGTTGGATTGGCCTAAGCGTTTTCACATAATTTGTGGGGTAGCAAGGGGCCTTCTCTATCTTCATCAAGACTCCACACTCAGAATCATTCATAGAGATCTCAAAGCAAGTAACGTTTTACTTGATAGTGAGATGAACCCAAAGATCTCAGACTTTGGCCTAGCCAGAATTTTGGAACTAGATCAGAGTGCAGCGAACACTCATCGCGTGGCTGGAACTTATGGATACATGGCACCGGAATATGCAATTGATGGGAACTTCTCAGTGAAATCTGATGTCTTTAGCTTTGGCATTTTGCTGCTAGAGATTGTATCAGGAAAGAAAAATATAGGGAATGGGAAGCAAGAAGAAAATAAAAACCTTATTGCATATGCATGGGATTTGTGGATAGATGGGAGGCCCTTAGAATTGATTGGTGAATACGGTGTAGACTCTTGCAACCTCTCTGAAGTGCTGCGTTGCATCCATATTAGTTTTTTGTGTCTGCAGCAGCATCCACAAGAAAGACCAAACATGTCTTCTGTTATGATGATGTTGGGTAGTGAAATTGGCCTGCCTCAACCCAAACAACCAGTTCTCTTTGTTGGTGGAGAATGTGCACATCATCAGGGATATTCTTCTTCATATAAGAATGAGACCATGCCTTCTGTCAATGAAATGAGCATTACACTTTTAGATGCTCGTTAG 4167 0.4173 MDQNLFQLSMFTLTIISFRFLFAVVAKDQNISGISDDNYCSNNRVCGANSNCDVTKGTACVCLDGFKLKSISGWDPADYTQGCVRDKALNCSTDHVFTKYSVYQEPSGTFYLLNQSLTEEDCRERCLSNCSCVAFSFGSGCKLWNGDLFDVRGVKEGKDLYIRMQASVQDPEEETHGHNERIIVGVIIGSTIAIISGIIFCCCYLHRRRSRLRGNIRTSEMVGHIDEEAKGDLELPLFDLSRIAMATDNFSVNNKLGEGGFGPVYKGTLHDGRQIAVKRLSRSSGQGLNEFKNEVILIAKLRHRNLVKLIGCCIQGEEKLLIYEYMPNRSLDYFIFDKIRGKLLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDNEMVPKISDFGLAKSFDGGDQSRGNTNRIMGTFGYMAPEYAVNGQFSVKSDVFSFGILVLEIVAGEKNRRLYQPNDDVYLYGHAWSLWEQGRPLELVDECLKNSWSLSEVQRCIHIGLLCAQQHPQDRPSMSSVVLMLGSEIDLPQPKFPSVFVGEPYDGLSSSDSKNKLSITDVEPRISGFFPLSVYLVFQTSIILAATTDTIHELQSLTKNQTLVSKNGNFELGFFTPGNSKNRYLGIWFIPDKTVVWVANREKPTNHSSVVLQISNTTQNILVFDQKKSVLWSATPIRKAKKNPILQLLDSGNLVLREQHDDNDDENPENEAQILWQSFDYPCDTLLPGMKLGKDLRTGFDRRLVAWKNENDPSPGNFSWGMHVTNYPEPMMWIGSRKSFNSGPWNGVQYSGKPTSRPHPVFEYIYFSNEEEVYFMFRLLNSSIKTARMMLNQTIYARESSVWVEEEHRWKVYGSLPRDFCDKYGACGPNGNCDPNKLPSPCECLRGFKPKSLLRWKGMEYAEGCVRDRPLSCKNDGFSKYVHMKLPDTEFSWLDQNMTLSECRAKCLTNCSCTAYTNSDIRGEGSGCAMWFGDLNDLRLQPDAGQDLYVRVPASELDTDNGRKVKVGIAVGSTMAVICGLLLAFFIRCRRRANLKKKLAVRDLFKEEQEDEDMELPFFDMSSIARATDNFSISNKLGEGGFGPVYKGRLENGQEIAVKRLSRGSGQGVKEFKNEIKLIAKLQHRNLVRLQGFSIQDEEKLLIYEYLPNKSLDCFIFDQTKRMLLDWPKRFHIICGVARGLLYLHQDSTLRIIHRDLKASNVLLDSEMNPKISDFGLARILELDQSAANTHRVAGTYGYMAPEYAIDGNFSVKSDVFSFGILLLEIVSGKKNIGNGKQEENKNLIAYAWDLWIDGRPLELIGEYGVDSCNLSEVLRCIHISFLCLQQHPQERPNMSSVMMMLGSEIGLPQPKQPVLFVGGECAHHQGYSSSYKNETMPSVNEMSITLLDAR* 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4462 1388 CDD STKc_IRAK 256 522 - -
Lja3g4462 1388 ProSiteProfiles Bulb-type lectin domain profile. 585 706 IPR001480 -
Lja3g4462 1388 SMART blect_4 591 719 IPR001480 -
Lja3g4462 1388 Coils Coil 1388 1388 - -
Lja3g4462 1388 Gene3D Transferase(Phosphotransferase) domain 1 326 528 - -
Lja3g4462 1388 Gene3D Transferase(Phosphotransferase) domain 1 1144 1344 - -
Lja3g4462 1388 ProSiteProfiles Protein kinase domain profile. 250 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4462 1388 Gene3D Phosphorylase Kinase; domain 1 1042 1143 - -
Lja3g4462 1388 Gene3D Phosphorylase Kinase; domain 1 224 325 - -
Lja3g4462 1388 SUPERFAMILY alpha-D-mannose-specific plant lectins 622 750 IPR036426 -
Lja3g4462 1388 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 546 - -
Lja3g4462 1388 SMART serkin_6 250 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4462 1388 SMART serkin_6 1068 1339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4462 1388 SUPERFAMILY Protein kinase-like (PK-like) 1050 1341 IPR011009 -
Lja3g4462 1388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1189 1201 IPR008271 GO:0004672|GO:0006468
Lja3g4462 1388 Pfam S-locus glycoprotein domain 777 889 IPR000858 GO:0048544
Lja3g4462 1388 CDD STKc_IRAK 1074 1339 - -
Lja3g4462 1388 Pfam PAN-like domain 91 151 IPR003609 -
Lja3g4462 1388 Pfam PAN-like domain 910 975 IPR003609 -
Lja3g4462 1388 ProSiteProfiles PAN/Apple domain profile. 910 990 IPR003609 -
Lja3g4462 1388 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 586 1385 - -
Lja3g4462 1388 CDD PAN_AP_plant 89 163 - -
Lja3g4462 1388 ProSiteProfiles PAN/Apple domain profile. 91 165 IPR003609 -
Lja3g4462 1388 ProSiteProfiles Protein kinase domain profile. 1068 1353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4462 1388 Gene3D Hepatocyte Growth Factor 908 983 - -
Lja3g4462 1388 CDD B_lectin 592 719 IPR001480 -
Lja3g4462 1388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
Lja3g4462 1388 SUPERFAMILY Protein kinase-like (PK-like) 234 538 IPR011009 -
Lja3g4462 1388 Gene3D - 579 716 IPR036426 -
Lja3g4462 1388 SMART ntp_6 92 164 IPR003609 -
Lja3g4462 1388 SMART ntp_6 910 989 IPR003609 -
Lja3g4462 1388 PANTHER - 14 546 - -
Lja3g4462 1388 PANTHER - 586 1385 - -
Lja3g4462 1388 CDD PAN_AP_plant 907 990 - -
Lja3g4462 1388 Pfam D-mannose binding lectin 631 745 IPR001480 -
Lja3g4462 1388 Pfam Protein tyrosine and serine/threonine kinase 1070 1280 IPR001245 GO:0004672|GO:0006468
Lja3g4462 1388 Pfam Protein tyrosine and serine/threonine kinase 252 520 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4462 Lja-Chr3 86186272 86199272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4462 174 537 Receptor kinase-like Gene Family AT4G23190 50.000 1.12e-118 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g4462 PK_Tyr_Ser-Thr 4.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4462 - - adu:107462330 1604.73