Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4457 ATGGCTTATGAACCTTCTTTTCTCTTGTCATACCTTTACCTCTTTTGGGCTTCTTTGCTTGCTATTGTTATTCCCTTTACGATTATCAAAGTCATAAGATCTCACTTAATTGAAAAGTCCAAAAATTCCACACTACCTCCAGGTCCCAAACCATGGCCTATTGCTGGTAATCTTCCTGAGATGCTTGCAAACAAGCCTGCATCTCGGTGGATACACAATCTGATGGAAGAAATGAACACTGGAATCGCATGTATCCGTTTGGGTAATGTCCATGTTATCCCCGTGACTTGCCCCACCATTGCCCGTGAATTCTTGAAAAAACATGATGCTGCTTTTCTATCAAGACCAAGAAGCATGGCCACTGATATTGTCACTAGTGGTTATCTCACAACAGCTCTTACACCCTTTGGTGAACAGTGGAAGAAAATGAAGAAAATAATGGTCACAAATTTGCTTTCCCCTCTCAAGCATCAATGGCTTCAAGGGAAAAGGAATGAAGAAGCTGATAACCTCATGTTCTACATCTACAACAAATGTTGCAAAGATGTGAACCATGACAATCATGGCGTTGTGAATGTTAGGACTGCTGCTACACATTATTGTGCTAATGTGTTCAGGAAATTGATTTTTAACACAAGGTACTTTGGAAAGGTGATGGAGGATGGAGGGCCTGGGTTTGAGGAAGAAGAGCATGTACATGCTGCTTTTGTATTACTCAAGTACATTTATGCTTTTTCTGTTTCTGATTATTTCCCATGGTTGGGAGGATTTGATTTGGATGGCCATAAGAGAAAGTTAGAGAATGCCAAGAGAGTCATGGAGAAGTATCATGATCCTATCATTCATGAAAGAATCAAAGAGTGGAATGATGGATTGAAGACTGTTGAAGAGGACTTGCTGGATGTGATGATCTCGCTCAAAGATGTGAACAATAATCCATTGTTGACAATGAAGGAAATCAAGGCACAAATAACAGAATTGATGATTGAAATGGTGGACAATCCATCAAATGCAATTGAATGGGCAGTAGCTGAAATGATAAATCAGCCTGAACTTCTCGAAAGAGCCACAAAAGAATTGGACAGTGTGGTTGGCAAAGAGAGGCTAGTCCAAGAATCAGACATTCACAAGCTCAACTTCGTTAAAGCTTGTGCAAGAGAAGCTTTTCGACTTCATCCCATTGTGGCTTTCAATGTTCCACATGTTTCCATGAACGACACAAAGGTTGGAAATTACTTGATCCCAAAGGGAAGTCATGTACTACTAAGTAGAATTGGTCTTGGAAGAAACCCAAAAGTGTGGAGTGACCCACACAAGTTCAAACCAGAAAGGCATCTCAAGAGTGATGGGTCTGATGTTGTTTTGATGGAGCCAGATTTGAAGTTCATATCATTTAGCACTGGAAGACGTAGTTGTCCTGGAGTCACACTTGGCACCACAATGACTATAATGCCACTTGCTAGGTTGCTCCATGGCTTCAGCTGGAGTGCACCTCCCAATGTATCAAGCCTAGACCTTACTGTGTCCAATGGTGGTATGCTTCTAGCTAAAAAGCCACTTGAAGTTGTAGCAAAACCAAGATTAGCAGCAAAGCTCTACTCTTGGTGA 1608 0.4123 MAYEPSFLLSYLYLFWASLLAIVIPFTIIKVIRSHLIEKSKNSTLPPGPKPWPIAGNLPEMLANKPASRWIHNLMEEMNTGIACIRLGNVHVIPVTCPTIAREFLKKHDAAFLSRPRSMATDIVTSGYLTTALTPFGEQWKKMKKIMVTNLLSPLKHQWLQGKRNEEADNLMFYIYNKCCKDVNHDNHGVVNVRTAATHYCANVFRKLIFNTRYFGKVMEDGGPGFEEEEHVHAAFVLLKYIYAFSVSDYFPWLGGFDLDGHKRKLENAKRVMEKYHDPIIHERIKEWNDGLKTVEEDLLDVMISLKDVNNNPLLTMKEIKAQITELMIEMVDNPSNAIEWAVAEMINQPELLERATKELDSVVGKERLVQESDIHKLNFVKACAREAFRLHPIVAFNVPHVSMNDTKVGNYLIPKGSHVLLSRIGLGRNPKVWSDPHKFKPERHLKSDGSDVVLMEPDLKFISFSTGRRSCPGVTLGTTMTIMPLARLLHGFSWSAPPNVSSLDLTVSNGGMLLAKKPLEVVAKPRLAAKLYSW* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4457 535 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4457 535 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4457 535 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4457 535 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4457 535 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4457 535 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4457 535 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4457 535 Pfam Cytochrome P450 46 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4457 535 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 15 533 - -
Lja3g4457 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Lja3g4457 535 SUPERFAMILY Cytochrome P450 46 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4457 535 Gene3D Cytochrome P450 38 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4457 535 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4457 Lja-Chr3 86088880 86092005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4457 10 533 Cytochrome P450 AT4G39950 52.471 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4457 - K14984 lja:Lj0g3v0137329.1 966.066