Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4454 ATGGGTGGGGAAGGCACCAAGCTCTTCACTTTGGCTGAGGTCGCTGAGCACAGCAATGTTAAAGACTGTTGGCTTGTCATTCATGGCAAGGTTTATAATGTGACAAAGTTCTTAGAGGACCACCCTGGCGGCGATGATGTCCTGTTGTCTTCCACAGGGAAAGATGCATCTAACGATTTCGATGATATTGGTCACAGCACTAGTGCTGTTTCCATGATGGATGAGTTCTATGTTGGAGACATTGATACATCAACCATCCCCTCCAGTGTTAAGTACACTCCTCCAAAACAGCCTCAGTATAATCAGGACAAGACATCAGAGTTCATAATCAGGATCCTCCAATTTCTTGTCCCCTTGTTTATCTTGGGTTTGGCTGTTGGTATTCGATTCTATACTAAATCAACATAA 408 0.4387 MGGEGTKLFTLAEVAEHSNVKDCWLVIHGKVYNVTKFLEDHPGGDDVLLSSTGKDASNDFDDIGHSTSAVSMMDEFYVGDIDTSTIPSSVKYTPPKQPQYNQDKTSEFIIRILQFLVPLFILGLAVGIRFYTKST* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4454 135 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 81 IPR001199 -
Lja3g4454 135 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 92 IPR036400 -
Lja3g4454 135 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 6 82 IPR001199 -
Lja3g4454 135 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 37 44 IPR018506 GO:0020037
Lja3g4454 135 Gene3D - 3 87 IPR036400 -
Lja3g4454 135 PRINTS Cytochrome B5 signature 31 41 IPR001199 -
Lja3g4454 135 PRINTS Cytochrome B5 signature 41 55 IPR001199 -
Lja3g4454 135 PRINTS Cytochrome B5 signature 56 63 IPR001199 -
Lja3g4454 135 PRINTS Cytochrome B5 signature 69 81 IPR001199 -
Lja3g4454 135 PANTHER CYTOCHROME B5 1 133 - -
Lja3g4454 135 PANTHER - 1 133 - -
Lja3g4454 135 SMART Cyt_b5_2 9 82 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4454 Lja-Chr3 86052217 86054129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4454 1 134 NADPH P450 reductases AT5G48810 63.971 8.83e-66 194