Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4447 ATGGACTTGAGAAATGCATGGGTTGGCTTCTTTCTGTTTTGTAGTTTCTGGTTTATCACTTTCTGTGGACAAGAAGATGATTTTCTGAGTCTTTCTTGTGGTGGAAGAACAAGTTTCAGTGATTCATCTAACATTTCATGGATCCCAGACACCACCTACATAACCACAGGGAAGACAACCACCATCACTTATAGTGATGGAACCTCTTCATTGAACATCTCAGCTAGGTTCTTCCCAGATTCCAGAAATCGAAAATGTTACAGAATACCTTTGAACAATGCAACAACTTTGGTTCTTGTCAGAGCAAAATTTGTTTACAAGAACTATGATGGACTTGGACAACCTCCTACATTTTTCGTTTCGATTGGGACAGCTCTAGCTGCTAAAGTAAATCTTACAGAAAATGACCCATGGAGTGAAGAGTTCCTATGGACAGTGAATAAGGATACACTGGCATTTTGTTTAAATGCAATTCCAAATGGTGGTTCACCTGTAATTTCTTCCCTTGAAATCAGACCACTTCCTCAAGGAGCCTACACAAGTGGTATGCAAGATTTTCCAAATAAGCTTCTAAGGAAGAGTTATCGAATTGATTGTGGACACAACAATGATTTCATCCGGTATCCCTTGGATCCATTTGATAGAATCTGGGATGCTGATAGAAATTTCACGCCCCATCATCTTGCAACTGGGTTTAAGATTCAGCTTAGCTTTGATCAGTTTAGTCTTGTGGAGGAACCACCCGAAGCTATTCTTCAAACTGGGAGAGTTTTGGCGCGAAAAAATATAATGACATATAACCTGCCCCTTGATACATCAGGGGACTACTACATCATCCTCTACTTTGCTGGAATTCTTCCTGTGTTCTCCTCTTTTGATGTCTTAATAAATGGAGATCTAATGAAATCAAACTACACAATAAAGAGCTCAGAAATCAGTGCTTTGTATGTAACAAGAAAAGGACTCAGCAGCTTGAATATAACACTGAAGGGAGTAGATTTTTACCCTCAGATCAATGCATTTGAGGTTTATAAGATGGTTGAAGTTCCACCTGATGCCTCCTCAACCACAGTTTCAGCTCTGCAGATTATTCAGCAATCCACTGGATTTGATCTTGGATGGCAAGATGATCCGTGCTCTCCTTCCCCGTGGGTTAGAATTGATTGCGAAGGAAGCCTTGTTACATCATTGGATCTGTCAGACATTAATTTGAGATCAATCAATCCTACATTCGGTGACTTGTTAGACCTTAAAACATTGGATTTGCACAACACGACGCTTTCAGGTGAAATCCAGAATTTGGATAGCTTGCAACATCTTGAGAAACTGAACCTGAGTTTCAATCAATTGACATCCCTCGGTGTAGATCTGGAGAACATGATTAGCCTTCAAATATTAGACTTGCAGAACAATAGTCTACAGGGAGTAGTGCCTGATAGCTTGGGAGAATTGGAGAACCTTCACTTTCTGAATCTGGCAAACAACAAACTACAAGGTCCACTACCACAATCTTTGAATAAAGAAATGTTGGAGATCAGAGCGTATGGGAATCTGTGCTTAACATTTTCCACAGCCACATGTGATGAAGCATCATCCAATCCTTCAATTGAGACACCACAAGTTACTTTAGTTTCTAAGAAGAAACACAATGTACATAGCCATCTAGCAATCATACTAGGAATGGCTGGAGGAGCCACACTAGCCTTTCTCTTAATGTATCTTTCAGTGATGATATACAAGACTAGAAAGCAACATGAAGTTTCACACACAGCAAAAGTAGAAATGGATATGAAGAACTGGGGTGCAGCGAAAGTCTTTTCATACAAAGAAATCAAATCAGCTACAAGAAACTTTAAAGAAGTTATAGGAAGGGGCAGTTTTGGATCTGTTTATCTTGGAAAGCTTCCAGATGGAAAATCAGTAGCGGTCAAAGTTCGGTTCGACAAATCCCAGCTTGGTGCTGATTCTTTTATTAATGAGGTCAACCTTTTGTCAACAATCAGGCATCAAAATCTTGTTTCTTTGGAAGGATTCTGTCATGAAGCAAAGCATCAGATATTAGTTTATGAGTACTTGCCTGGTGGATCTCTGGGTGACCACCTCTATGGTACAAACAATAAAAAGACTTCCTTAAGTTGGGTTCGGAGGCTGAAAATTGCTGTTGACGCAGCAAAAGGATTGGATTATTTGCACAATGGAAGTGAACCACGAATCATACATCGCGATATCAAGTGCAGTAATATCCTTTTAGATGTGGATATGAATGCCAAAGTCTGTGACTTAGGCCTCTCCAAGCAAATAACCCAAGCAGATGCAACTCATGTCACCACTGTTGTCAAGGGAACTGCAGGGTATCTTGATCCAGAGTATTATTCCTCTCAACAGCTGACAGAGAAAAGTGATGTATATAGCTTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAGCCATTGACTCACTCTGGAACTCCTGACTCATTCAATTTGGTGTTATGGGCCAAGCCTTATTTGCAGGCAGGTGCAATTGAGATAGTGGATGAGGACATAAAAGGAACATTTGATCCTTTGAGCATGAAGAAAGCAGCTTCCATTGCTGTAAAGTCAGTGGAGAGAGATGCATCACAGAGGCCATCTATTGCAGAGGTATTAGCTGAGCTAAAGGAAGCCTATAGTCTTCAGCTCAGATTCCTTGAATCTTTTCAAAATAAGAGCTGA 2718 0.4025 MDLRNAWVGFFLFCSFWFITFCGQEDDFLSLSCGGRTSFSDSSNISWIPDTTYITTGKTTTITYSDGTSSLNISARFFPDSRNRKCYRIPLNNATTLVLVRAKFVYKNYDGLGQPPTFFVSIGTALAAKVNLTENDPWSEEFLWTVNKDTLAFCLNAIPNGGSPVISSLEIRPLPQGAYTSGMQDFPNKLLRKSYRIDCGHNNDFIRYPLDPFDRIWDADRNFTPHHLATGFKIQLSFDQFSLVEEPPEAILQTGRVLARKNIMTYNLPLDTSGDYYIILYFAGILPVFSSFDVLINGDLMKSNYTIKSSEISALYVTRKGLSSLNITLKGVDFYPQINAFEVYKMVEVPPDASSTTVSALQIIQQSTGFDLGWQDDPCSPSPWVRIDCEGSLVTSLDLSDINLRSINPTFGDLLDLKTLDLHNTTLSGEIQNLDSLQHLEKLNLSFNQLTSLGVDLENMISLQILDLQNNSLQGVVPDSLGELENLHFLNLANNKLQGPLPQSLNKEMLEIRAYGNLCLTFSTATCDEASSNPSIETPQVTLVSKKKHNVHSHLAIILGMAGGATLAFLLMYLSVMIYKTRKQHEVSHTAKVEMDMKNWGAAKVFSYKEIKSATRNFKEVIGRGSFGSVYLGKLPDGKSVAVKVRFDKSQLGADSFINEVNLLSTIRHQNLVSLEGFCHEAKHQILVYEYLPGGSLGDHLYGTNNKKTSLSWVRRLKIAVDAAKGLDYLHNGSEPRIIHRDIKCSNILLDVDMNAKVCDLGLSKQITQADATHVTTVVKGTAGYLDPEYYSSQQLTEKSDVYSFGVVLLELICGREPLTHSGTPDSFNLVLWAKPYLQAGAIEIVDEDIKGTFDPLSMKKAASIAVKSVERDASQRPSIAEVLAELKEAYSLQLRFLESFQNKS* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4447 905 SUPERFAMILY Protein kinase-like (PK-like) 596 887 IPR011009 -
Lja3g4447 905 SUPERFAMILY L domain-like 357 507 - -
Lja3g4447 905 Pfam Protein kinase domain 618 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4447 905 Pfam Leucine rich repeat 439 497 IPR001611 GO:0005515
Lja3g4447 905 ProSitePatterns Protein kinases ATP-binding region signature. 622 644 IPR017441 GO:0005524
Lja3g4447 905 SMART serkin_6 616 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4447 905 Gene3D Ribonuclease Inhibitor 358 529 IPR032675 -
Lja3g4447 905 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 900 - -
Lja3g4447 905 SMART LRR_typ_2 437 459 IPR003591 -
Lja3g4447 905 SMART LRR_typ_2 484 507 IPR003591 -
Lja3g4447 905 SMART LRR_typ_2 460 483 IPR003591 -
Lja3g4447 905 CDD STKc_IRAK 622 889 - -
Lja3g4447 905 ProSiteProfiles Protein kinase domain profile. 616 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4447 905 Pfam Malectin-like domain 31 346 IPR024788 -
Lja3g4447 905 Gene3D Phosphorylase Kinase; domain 1 576 691 - -
Lja3g4447 905 Gene3D Transferase(Phosphotransferase) domain 1 692 899 - -
Lja3g4447 905 PANTHER OS07G0107800 PROTEIN-RELATED 12 900 - -
Lja3g4447 905 Gene3D - 193 347 - -
Lja3g4447 905 ProSiteProfiles Leucine-rich repeat profile. 439 461 IPR001611 GO:0005515
Lja3g4447 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4447 Lja-Chr3 86004413 86010178 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4447 7 900 Receptor kinase-like Gene Family AT5G48740 62.192 0.0 1115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lja3g4447 Malectin_like 9.6e-54 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4447 - - lja:Lj0g3v0196229.1 1566.59