Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4444 ATGGCAACTCCTCCACCTCCAGCCACCACCTCCGCCGTCAAGAAACCCCAACCGATCCCTTGGACCCACCAAGAGACGGTGAACCTCATCCGCGCGTACCAAGAGAAATGGTACTCCCTCAAACGCGGCCCTCTCCGCTCCAACCAGTGGGAAGAGGTCGCCGTCGTTGTCGCCGCGCGATGCGGCTACGACTTCGCCCACCCTTCTAAGTCCGCCCTCCAGTGCCGCCATAAGATCGAGAAGCTCCGCCAGCGCCACCGCGCTGAGAAACACCGCCCTGCCACCCGCCCCTGGCAGTATTTCTCCCTCATGGATGACCTCGAGCGTGGTCCGCTCCCTATCTCCGCTCATCCCCTCGCGTCTTTGCCCCCTGGCGTCGATGAAGATGAAGAAGATGATGAAATTGAACATGGTGGTGAAGGTGATGTTCATGATCATGATGATAGGGTTAACTATATGAAATCTAAGAGTGTGAATTATATTCTTAAACAGAGATCCGCACCATCTGCAATCAATGCAACCAAGAATCGAGCCGCGTTTAATGTTTGGGATGATGAACATGATGATGGTGATGATGATGAGGTTGAGGAGGAGGAGGAGGAGGAAGAGGAAGATGAAGGATTGGGAATGAGTGAGAGTGGGTTGGTTTTAGGGTTAACTGAAGAGATTAAAGCTTTCGGGGAGCGATTTATTGGATTGGAGAATTTGAAGATGGAGATGATGAAGGAAACTGAGAGGTTTAGGTTTGAGATGGAGAAGAAGAGGATGAGGATGATTCTCGAATCGCAGCGCCGGGTTGTTGATTCCATTGGCAGGGCTTTTGGTTCTTCTTCTTCTTCAAAAAGGATGAAGATTACTCGCCCGATTTGA 870 0.5138 MATPPPPATTSAVKKPQPIPWTHQETVNLIRAYQEKWYSLKRGPLRSNQWEEVAVVVAARCGYDFAHPSKSALQCRHKIEKLRQRHRAEKHRPATRPWQYFSLMDDLERGPLPISAHPLASLPPGVDEDEEDDEIEHGGEGDVHDHDDRVNYMKSKSVNYILKQRSAPSAINATKNRAAFNVWDDEHDDGDDDEVEEEEEEEEEDEGLGMSESGLVLGLTEEIKAFGERFIGLENLKMEMMKETERFRFEMEKKRMRMILESQRRVVDSIGRAFGSSSSSKRMKITRPI* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4444 289 Pfam Myb/SANT-like DNA-binding domain 20 107 IPR044822 -
Lja3g4444 289 Gene3D - 21 88 - -
Lja3g4444 289 ProSiteProfiles Myb-like domain profile. 20 83 IPR001005 -
Lja3g4444 289 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 12 281 - -
Lja3g4444 289 MobiDBLite consensus disorder prediction 118 148 - -
Lja3g4444 289 MobiDBLite consensus disorder prediction 185 209 - -
Lja3g4444 289 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 281 IPR044823 -
Lja3g4444 289 MobiDBLite consensus disorder prediction 178 212 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4444 21 107 Trihelix Transcription Factor Family AT3G14180 31.868 4.04e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lja3g4444 Myb_DNA-bind_4 1.2e-16 CL0123