Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4437 ATGGGTTTTCACAATCATGCTAATCTGTTGTTGATTTTTCTACTCATATTCTCCATATTTTCTTCTGTTTTGAGCTCTGTTAACGATACAATCACACCATCCAAATCCCTCAGAGACCCCAACACAATCACTTCCAAAAACGGTGACATCAAGCTAGGATTCTTCACCCCTGAAAACTCCACAAATCGCTACGTAGCAATGTGGTACATCTCCCAATCCTACAACATATGGGTTGCAAACAGAGATCAACCACTAAACGATTCATCCAGTGTGTTCAAAATCAACAAGGATGGGAATCTTGTCATCTTGAACGCTCAGAATCGGGTGATATGGTCAACAAACATTTCAGTTTCAAGCAACTCAACAAGAACAGCTCAGATTCTCGATTCAGGAAACCTGATCCTGCGAGATGATGAAACCGGAGAAACAGTTTGGGACACTTACTCCCATCCTAGCGGATCAGCTGTCCCAGGAATGAGAATCTCAACGAACCGAATCACCGGGGAGAAAATCCAGTACACCTCATGGAAAAACAACACTGATCCTTCTTCAGGCTACTTCACAGCTAGCCTAGAACGGTTGGACACTCCAGAAGTGTTTTTCTGGCGCAACAAAACTCATCCATATTGGAGAACTGGTCCATGGAATGGACGAGTTTTCCTCGGCGCACCGAGGATGCTAACTGAGTATCTGGCTGGATGGGAATTTCAAAAGGATGATGGTCATGGAAATTCTTATCTTACTTACAATTACGGTAAGCAGAACACCTTTGGAATTCTGCGCATGACTTCTAATGGTACACTTCAATATATAAGCTTTTACAACAAGATAGAAATAATAAGACTTGATGTGGACCAAAATGTGTGTGATTTCTATGGAACTTGTGGGGCTTTTGGGAACTGTGACGCTTCGAGAGACCCGATTTGCAGCTGTTTTGAGGGGTTTAGGCCGCGGGATGCGGAGGCATGGAGCGCGAAGAATTGGACCGGCGGGTGCGTGAGGACGGCGGAGCTGCGGTGTGTGGAGGTGAAAAATGGGAGTGAAGTGCAGCAAGATGGGTTTTTGTTGTTTAATAATATGAAGGTGCCTGATTTTGCAGAGAGATCTGATGGGGATCAAGATAAGTGTGGGAGGGATTGCTTAGGAAATTGTTCTTGTTTGGCTTATGGGTATGATCCTTATATTGGTTGCATGTATTGGAGTAGGGATTTGATTGATTTGCAGAAATTTCCAAGTGGAGGTGTTGATCTCTTCATTCGTGTGCCTGCTGAACTAGTTAAAGGCAAAGGGGGAAAAGGAAACATGAAATTGATTATTGCCATTTCTGTGGCAATTGGTGCAGTTACCTTAGCTGTTTCTTCATATATTTTGTGGCGGAAATTTACTGCCAAGCCTACAGGGAGCCAGCCTCAATTCGAAGATCATAAACAAATGAAACTAGATGAGCTACCACTATTTGGTTTTGAAACGCTTGCAACCGCTACAAAAGGCTTTCATTTGGGTAATGTGCTTGGGAAAGGAGGTTTTGGTCCGGTATATAAGGGAGATTTGGAAGATGGCCAAGAAATTGCAGTAAAAAGACTCTCAAAAGCTTCTGGACAAGGATTAGAAGAATTCATGAATGAAGTTTTGGTGATCTCCAAACTTCAACATCGCAATCTTGTAAGACTTCTTGGTTGTTGTGTTGAGCGAGATGAACAGATCCTGGTTTATGAGTTCATGCCAAATAAGAGTTTGGACGCATTTCTCTTTGATCCACTTCAAAAGAAAATTTTAGATTGGAGAAAGCGTTTCAACATAATTGAAGGAATAGCTCGGGGTATACTTTATCTCCATAGAGACTCGAGGCTAAGGATTATCCATAGAGATCTTAAAGCAAGCAACATCTTACTAGATGGTGAGATGACTCCAAAGATATCAGATTTTGGTTTAGCCAGAATTTTCAAAGGTGGTGAAGATGATGAAGCTAACACAATAAGGGTTGTTGGAACTTATGGTTATATGCCTCCTGAATATGCAATGGAGGGGCTTTTCTCAGAGAAATCAGACGTGTATAGCTTTGGAGTTTTATTGCTAGAGATTGTTAGTGGAAGAAGAAACACTAGCTTTCGCAATGATGATTCACTTAGCCTTGTAGGATTTGCATGGAAACTATGGACAGAAGAAAACATTATTTCTCTAATCGATCCAGAGATATGGGATCCAAGCGTTGAGAGTAGCATGTTAAGGTGCATACACATAGGACTTCTATGTGTGCAAGAAATCCCAAGAGAAAGGCCAGCTATATCCACTGTAGTTTTGATGCTCATTAGTGAGATCACACAACTGCCTCCTCCAGGGCAAGTTGCATTTGTTCAGAAGCACAATGCTAAAAGTTCAGACTCTTCTCAAAAGAGCCAGTGTAGCTCCAACAATAATGTCACTCTTAGCGAAGTTCATGGCAGGTAG 2448 0.4199 MGFHNHANLLLIFLLIFSIFSSVLSSVNDTITPSKSLRDPNTITSKNGDIKLGFFTPENSTNRYVAMWYISQSYNIWVANRDQPLNDSSSVFKINKDGNLVILNAQNRVIWSTNISVSSNSTRTAQILDSGNLILRDDETGETVWDTYSHPSGSAVPGMRISTNRITGEKIQYTSWKNNTDPSSGYFTASLERLDTPEVFFWRNKTHPYWRTGPWNGRVFLGAPRMLTEYLAGWEFQKDDGHGNSYLTYNYGKQNTFGILRMTSNGTLQYISFYNKIEIIRLDVDQNVCDFYGTCGAFGNCDASRDPICSCFEGFRPRDAEAWSAKNWTGGCVRTAELRCVEVKNGSEVQQDGFLLFNNMKVPDFAERSDGDQDKCGRDCLGNCSCLAYGYDPYIGCMYWSRDLIDLQKFPSGGVDLFIRVPAELVKGKGGKGNMKLIIAISVAIGAVTLAVSSYILWRKFTAKPTGSQPQFEDHKQMKLDELPLFGFETLATATKGFHLGNVLGKGGFGPVYKGDLEDGQEIAVKRLSKASGQGLEEFMNEVLVISKLQHRNLVRLLGCCVERDEQILVYEFMPNKSLDAFLFDPLQKKILDWRKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDGEMTPKISDFGLARIFKGGEDDEANTIRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNTSFRNDDSLSLVGFAWKLWTEENIISLIDPEIWDPSVESSMLRCIHIGLLCVQEIPRERPAISTVVLMLISEITQLPPPGQVAFVQKHNAKSSDSSQKSQCSSNNNVTLSEVHGR* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4437 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Lja3g4437 815 Pfam PAN-like domain 349 407 IPR003609 -
Lja3g4437 815 CDD PAN_AP_plant 346 422 - -
Lja3g4437 815 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Lja3g4437 815 SMART ntp_6 349 421 IPR003609 -
Lja3g4437 815 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 18 813 - -
Lja3g4437 815 Pfam Protein tyrosine and serine/threonine kinase 499 766 IPR001245 GO:0004672|GO:0006468
Lja3g4437 815 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 813 - -
Lja3g4437 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 182 IPR036426 -
Lja3g4437 815 MobiDBLite consensus disorder prediction 787 815 - -
Lja3g4437 815 Pfam D-mannose binding lectin 76 177 IPR001480 -
Lja3g4437 815 SMART blect_4 34 151 IPR001480 -
Lja3g4437 815 SMART serkin_6 498 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4437 815 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Lja3g4437 815 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Lja3g4437 815 Gene3D Phosphorylase Kinase; domain 1 472 573 - -
Lja3g4437 815 PIRSF SRK 2 815 IPR024171 GO:0004674
Lja3g4437 815 CDD B_lectin 34 151 IPR001480 -
Lja3g4437 815 CDD STKc_IRAK 504 769 - -
Lja3g4437 815 ProSiteProfiles Protein kinase domain profile. 498 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4437 815 ProSiteProfiles PAN/Apple domain profile. 340 422 IPR003609 -
Lja3g4437 815 Gene3D - 22 150 IPR036426 -
Lja3g4437 815 SUPERFAMILY Protein kinase-like (PK-like) 483 787 IPR011009 -
Lja3g4437 815 Gene3D Transferase(Phosphotransferase) domain 1 574 776 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4437 Lja-Chr3 85870306 85876678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4437 429 810 Receptor kinase-like Gene Family AT4G23150 51.436 5.52e-123 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g4437 PK_Tyr_Ser-Thr 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4437 - - gmx:100786846 1203.73