Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4436 ATGGGTTTTCACAATCATGCTAATCTGTTGTTGATTTTTCTACTCATATTCTCCATATTTTCTTCTGTTTTGAGCTCTGTTGACGATACAATCACACCATCCAAACCCATCAGAGACCCCAACACAATCACTTCCAAAAACGGTGACATCAAGCTAGGATTCTTCACCCCTGAAAACTCCACAAATCGCTACGTAGCAATGTGGTACATCTCCCAATCCTACAACATATGGGTTGCAAACAGAGATCAACCACTAAACGATTCATCCAGTGTGTTCAAAATCAACAAGGATGGGAATCTTGTCATCTTGAACGCTCAGAATCGGGTGATATGGTCAACAAACATTTCAGTTTCAAGCAACTCAACAAGAACAGCTCAGATTCTCGATTCAGGAAACCTGATCCTGCGAGATGATGAAACCGGAGAAACAGTTTGGGACACTTACTCCCATCCTAGCGGATCAGCTGTCCCAGGAATGAGAATCTCAACGAACCGAATCACCGGGGAGAAAATCCAGTACACCTCATGGAAAAACAACACTGATCCTTCTTCAGGCTACTTCACAGCTAGCCTAGAACGGTTGGACACTCCAGAAGTGTTTTTCTGGCGCAACAAAACTCATCCATATTGGAGAACTGGTCCATGGAATGGACGAGTTTTCCTCGGCGCACCGAGGATGCTAACTGAGTATCTGGCTGGATGGGAATTTCAAAAGGATGATGGTCATGGAAATTCTTATCTTACTTACAATTACGGTAAGCAGAACACCTTTGGAATTCTGCGCATGACTTCTAATGGTACACTTCAATATATAAACTTTTACAACAAGACGGAAGCGTATAGACTCGAGGTGGGTCAAAATGTGTGTGATTTCTATGGCACTTGTGGGGCTTTTGGGAACTGTGACGCTTTCAGTGACCCGATTTGCAGCTGTTTTGAGGGGTTTAGGCCGAGGGATGCGGAGGCGTGGAGCGCAAAGAATTGGACCGGCGGGTGTGTGAGGACGGCGGAGCTGCGGTGTGAGGAGGTGAAGAATGGGAGTGAAGTGCAGCAAGATGAGTTTTTGTTGTTTAATAATATGAAGGTGCCCGATTTTGCAGAGTTATCTGGTGGGGAGCAAGATAAGTGTCGGCCGGATTGCTTAGCAAATTGTTCTTGCTTGGCGTATGCGTATGACCTTACTATTGGTTGCATGTATTGGAGTAGGGATTTGATTGACTTGCAGAAATTTGAAAAGAGAGGTGTTGATCTCTTCATTCGTGTGCCTGCAGAACTAGTTAAAAGCAAAGGGGGGAAAGGAAACATGACATTGATTATTGCCATTTCTGTGGCAATTGGAGCAGTTACCTTAGCTGTTTGTTCATATATTTTGTGGCGGAAATTAACTGCCAAACCTACAGGGAGCCAGCCTCAATTCAAAGATCAGAAACAAATGAAACTAGATGAGCTACCACTATTTAGTTTTGAAACGCTTGCAACCGCCACAAAAGGCTTTCATTTGGGTAATGTGCTTGGGAAAGGAGGTTTTGGTCCAGTATATAAGGGAGAATTGGAAGATGGCCAAGAAATTGCAGTAAAAAGACTCTCAAAATCTTCTGGACAAGGATTAGAAGAATTCATGAATGAAGTTGTGGTGATCTCTAAACTTCAACATCGCAATCTTGTAAGACTTCTTGGTTGTTGTGTTGAGCGAGAAGAACAGATCCTGGTTTATGAGTTCATGCCAAATAAGAGTTTGGACGCATTTCTCTTTGATCCACTTCAAAAGAAAATTTTAGATTGGAGAAAGCGTTTTAACATAATTGAAGGAATAGCTCGGGGTATACTTTATCTCCACAGAGACTCAAGGCTAAGGATTATCCATAGAGATCTAAAAGCAAGCAACATCTTGCTAGATGGTGAGATGATTCCAAAGATATCAGATTTTGGTTTAGCCAGAATTTTCAAAGGTGGTGAAGATGATGAAGCTAACACAATAAGGGTTGTTGGAACTTATGGTTATATGCCTCCTGAATATGCAATGGAGGGGCTTTTCTCAGAGAAATCAGACGTGTATAGCTTTGGAGTTTTATTGCTAGAGATTGTTAGTGGAAGAAGAAACACTAGCTTTCGCAATGACGATTCGCTTAGCCTTATAGGATTTGCATGGAAACTATGGACAGAAGAAAACATTATTTCTCTAATAGATCCAGATATATGGGATCCAAGCGTTGAAAGTACCATGTTAAGGTGCATACACATAGGACTTCTATGTGTGCAAGAAATCCCAAGAGAAAGGCCAGCTATATCCACTGTAGTTTTGATGCTCATAAGTGAGATCACACAACTGCCTCCTCCAGGGCAAGTTGCATTTGTCCAGAAGCACAATGCTAAAAGTTCAGAGTCTTCTCAAAAGAGTCAGTGTAGCTCCAACAATAATGTAACTCTTACCCCAACAACAAAGCCTAAGCAAAGCCTACACTATTGGGAGAAGAATCCCCATAAACATCACCCAACCCCTCTCTTTGGCTGA 2511 0.4225 MGFHNHANLLLIFLLIFSIFSSVLSSVDDTITPSKPIRDPNTITSKNGDIKLGFFTPENSTNRYVAMWYISQSYNIWVANRDQPLNDSSSVFKINKDGNLVILNAQNRVIWSTNISVSSNSTRTAQILDSGNLILRDDETGETVWDTYSHPSGSAVPGMRISTNRITGEKIQYTSWKNNTDPSSGYFTASLERLDTPEVFFWRNKTHPYWRTGPWNGRVFLGAPRMLTEYLAGWEFQKDDGHGNSYLTYNYGKQNTFGILRMTSNGTLQYINFYNKTEAYRLEVGQNVCDFYGTCGAFGNCDAFSDPICSCFEGFRPRDAEAWSAKNWTGGCVRTAELRCEEVKNGSEVQQDEFLLFNNMKVPDFAELSGGEQDKCRPDCLANCSCLAYAYDLTIGCMYWSRDLIDLQKFEKRGVDLFIRVPAELVKSKGGKGNMTLIIAISVAIGAVTLAVCSYILWRKLTAKPTGSQPQFKDQKQMKLDELPLFSFETLATATKGFHLGNVLGKGGFGPVYKGELEDGQEIAVKRLSKSSGQGLEEFMNEVVVISKLQHRNLVRLLGCCVEREEQILVYEFMPNKSLDAFLFDPLQKKILDWRKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDGEMIPKISDFGLARIFKGGEDDEANTIRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNTSFRNDDSLSLIGFAWKLWTEENIISLIDPDIWDPSVESTMLRCIHIGLLCVQEIPRERPAISTVVLMLISEITQLPPPGQVAFVQKHNAKSSESSQKSQCSSNNNVTLTPTTKPKQSLHYWEKNPHKHHPTPLFG* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4436 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Lja3g4436 836 SMART blect_4 34 151 IPR001480 -
Lja3g4436 836 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 19 810 - -
Lja3g4436 836 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 810 - -
Lja3g4436 836 Pfam D-mannose binding lectin 76 177 IPR001480 -
Lja3g4436 836 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Lja3g4436 836 Gene3D Phosphorylase Kinase; domain 1 472 573 - -
Lja3g4436 836 Gene3D Transferase(Phosphotransferase) domain 1 574 776 - -
Lja3g4436 836 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Lja3g4436 836 MobiDBLite consensus disorder prediction 787 836 - -
Lja3g4436 836 Gene3D - 22 150 IPR036426 -
Lja3g4436 836 Pfam Protein tyrosine and serine/threonine kinase 499 766 IPR001245 GO:0004672|GO:0006468
Lja3g4436 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 182 IPR036426 -
Lja3g4436 836 PIRSF SRK 2 816 IPR024171 GO:0004674
Lja3g4436 836 SUPERFAMILY Protein kinase-like (PK-like) 482 789 IPR011009 -
Lja3g4436 836 CDD B_lectin 34 151 IPR001480 -
Lja3g4436 836 MobiDBLite consensus disorder prediction 787 819 - -
Lja3g4436 836 CDD STKc_IRAK 504 769 - -
Lja3g4436 836 ProSiteProfiles PAN/Apple domain profile. 340 422 IPR003609 -
Lja3g4436 836 Pfam PAN-like domain 349 407 IPR003609 -
Lja3g4436 836 SMART ntp_6 349 421 IPR003609 -
Lja3g4436 836 CDD PAN_AP_plant 338 422 - -
Lja3g4436 836 ProSiteProfiles Protein kinase domain profile. 498 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4436 836 SMART serkin_6 498 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4436 Lja-Chr3 85838060 85844839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4436 486 810 Receptor kinase-like Gene Family AT4G11530 57.958 7.18e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g4436 PK_Tyr_Ser-Thr 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4436 - - gmx:100786846 1174.07