Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4427 ATGGCCAAACACAGTTTTCTTCTCATCTTCTTACTATCCTTCGTTCTTGCACCCACAAATCCATTTTTTTGTGATGCTAGCAATGACGACGGAGATCATAAACTTTACATCGTATACATGGGTTCACTTCCTGTTCAGAGAGATTCTTCTAATTATTCCCCAACCTCTCACCACATCAGCATGTTGCAACAGGTTGTGGGTGGAAGCGATGTGACAAAGCACCATGTTAGAAGCTACAAGAGGAGCTTCAATGGTTTTGCAGCGAAGCTCAGTGAAAAACATAAAAAAATGATTGCTGGCATGGACGGTGTTGTTTCAGTTTTTCTGAGCAAAACTCTTCATATTCAAACGACGAGGTCATGGGACTTCTTAGGGTTCTCAGAATCAATTAAAAGACAACAGAAATATGAGAGTGATTTGGTGATCGGGGTCATTGACACCGGAATCTGGCCAGAATCAGATAGTTTCACCGACCAAGGTGTTAGTCATATTCCGGCTAAGTGGAAGGGCCATTGCAAAGGGGGTGCTAACTTCACTTGTAACAACAAGATCATTGGGGCGCGGTTCTATAGCCTTCCCCAAGACGCTACCGCAAATGATCACAACACTATAAGAGACATCAATGGGCACGGAACCCACACTTCCTCAACGGCAGCTGGAAACACCGTCATTGGTGCAAGCTTTTACGGATTCGCACAAGGCACCGCAAGGGGTGCTGTTCCATCTGCAAGGATCGCTGCATACAAAGTCTGCTTCAACGACGGTTGCGACGATGCTAGTACTTTAGCAGCTTTCGATGATGCCATTGCTGATGGTGTCGACATCATCAGCATCTCAATCGGGACCGACAAAGCCTATGACTTTACAAGTGACACCATTGCAATCGGTTCCTTCCATGCCATGGAGAGAGGGATTCTCACAGTGCAGAGTGCAGGGAACTCTGGTCCTGCTTCAGGCTCTATTATGAGCGTGGCGCCGTGGTTGTTAACTGTCGCAGCCAGCACCATAGATCGACAGTTCATTGACAAGGTGATTCTCGGGAATGGGAAGACATTGATTGGAAGATCCGTGAATGCTGTCGTTTCAAATGGGACAAAGTTTCCTATTGCTAAGCGGAATGCAAATGATGAAAGGTGCAGAGGATATTCTGACTTGTGTCAATGTCTAAGAAGCGAGATCGTGAAGGGAAAGCTGGTTTTATGCGAAGGTTTGTTGAAAGATGAAGCAGCTTATGAAAAAGGTGCAGTTGGTTCAATCACCACGGATTTAGGAAACCCTGACAATGATTGCTCTAAGGTGACTTATTTCCCTTCACTGAACCTCAATCCAAAAGACTACGCTATTATCCAGGACTACACAAATTCAACAAACAATCCTGAAGCTGAGATATTGAATAGCGAGAGTTTTGAAGATCATAGCGCTCCTAAGGTTGCTAGCTTCTCCTCCCGCGGACCGAATCCCTTGATTTCGGAGATTATGAAACCGGATGTAAGTGCTCCTGGGGTTGATATCTTGGCAGCATGGTCACCTATAGCGTCACCCTCACTTTATTCAAGTGATAAGAGAAAGGTCAATTACAATGTACTATATGGTACATCAATGGCATGCCCTCATGTGTCCGGAGTCGCCGCGTATGTGAAATCATTTCACCCAGATTGGTCGCCAGCCGCGATCAAATCAGCAATAATGACCACAGCCGAGCCATTGAATGGGAATTATAATATGACTGGTGAGTTCTCTTATGGAGCTGGGAATGTCAATCCAGTAAAAGCTATTGACCCTGGCCTTGTATATGACATTTCCATGAAAGACTATGTCAATATGCTTTGCAACTATGGTTATAGTGCTAAGAAACTTAAGATTATTGCTGGAGCTCATTCACTAAGTTGTTATGGAGAACACCATAGAAGCTTGGTCAAAGATTTAAACTACCCTGCAATAACGGTAAATGTTAAGCCTTTGGAGCCTTACATTATCAAGGTTAATAGAACAGTGACGAATGTTGGCTTTCCTCACAACTTGACCTACAAGGCTACCGTCTTGCCGAATCTGAAAATGAACATCACGGTGGAGCCTGAGGTTCTGAGGTTCGAGTCATTGCATGAGAAAAAATCTTTTATTGTTATGGTTTCTGGAGGAGGATTGAGAATAAGTCCGCCCCTGATGGTGGCCGGTTCAGATCTGAAAATAGAAGGGGACGATGGCCGACGACGAGATGATTGA 2223 0.4462 MAKHSFLLIFLLSFVLAPTNPFFCDASNDDGDHKLYIVYMGSLPVQRDSSNYSPTSHHISMLQQVVGGSDVTKHHVRSYKRSFNGFAAKLSEKHKKMIAGMDGVVSVFLSKTLHIQTTRSWDFLGFSESIKRQQKYESDLVIGVIDTGIWPESDSFTDQGVSHIPAKWKGHCKGGANFTCNNKIIGARFYSLPQDATANDHNTIRDINGHGTHTSSTAAGNTVIGASFYGFAQGTARGAVPSARIAAYKVCFNDGCDDASTLAAFDDAIADGVDIISISIGTDKAYDFTSDTIAIGSFHAMERGILTVQSAGNSGPASGSIMSVAPWLLTVAASTIDRQFIDKVILGNGKTLIGRSVNAVVSNGTKFPIAKRNANDERCRGYSDLCQCLRSEIVKGKLVLCEGLLKDEAAYEKGAVGSITTDLGNPDNDCSKVTYFPSLNLNPKDYAIIQDYTNSTNNPEAEILNSESFEDHSAPKVASFSSRGPNPLISEIMKPDVSAPGVDILAAWSPIASPSLYSSDKRKVNYNVLYGTSMACPHVSGVAAYVKSFHPDWSPAAIKSAIMTTAEPLNGNYNMTGEFSYGAGNVNPVKAIDPGLVYDISMKDYVNMLCNYGYSAKKLKIIAGAHSLSCYGEHHRSLVKDLNYPAITVNVKPLEPYIIKVNRTVTNVGFPHNLTYKATVLPNLKMNITVEPEVLRFESLHEKKSFIVMVSGGGLRISPPLMVAGSDLKIEGDDGRRRDD* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4427 740 Gene3D Peptidase S8/S53 domain 139 605 IPR036852 GO:0004252|GO:0006508
Lja3g4427 740 Pfam Peptidase inhibitor I9 36 115 IPR010259 -
Lja3g4427 740 SUPERFAMILY Subtilisin-like 121 593 IPR036852 GO:0004252|GO:0006508
Lja3g4427 740 Pfam Subtilase family 138 572 IPR000209 GO:0006508|GO:0008236
Lja3g4427 740 CDD Peptidases_S8_3 113 566 IPR034197 -
Lja3g4427 740 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 35 720 - -
Lja3g4427 740 CDD PA_subtilisin_like 344 463 - -
Lja3g4427 740 Pfam Fibronectin type-III domain 641 712 IPR041469 -
Lja3g4427 740 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Lja3g4427 740 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Lja3g4427 740 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Lja3g4427 740 Gene3D - 337 470 - -
Lja3g4427 740 ProSitePatterns Serine proteases, subtilase family, serine active site. 531 541 IPR023828 -
Lja3g4427 740 Gene3D - 609 726 - -
Lja3g4427 740 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 720 IPR045051 -
Lja3g4427 740 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 115 IPR037045 -
Lja3g4427 740 ProSiteProfiles Serine proteases, subtilase domain profile. 120 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4427 Lja-Chr3 85681829 85687224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4427 40 716 Subtilisin-like Serine Gene Family AT5G59190 55.637 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4427 - - lja:Lj3g3v0549610.1 963.37