Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4424 ATGGAACTACACTGGGCTTGGGTGTCTACTGCCACTTTGGCTACATGCTACGTTTTTGTAGCCATATTCTTGAGGAGGCTGAATGGGTGGTACTATGATTATGATGTGAAGCTAACAAAGAAACAACTCCCTCTTCCTCCTGGTGACATGGGATGGCCTCTTATTGGCAATCTAATTTCCTTCATCAAAGATTTCTCATCCGGCCACCCTGATTCATTCATCAACAATCTTCATCTCAAATATGGACGAACCGGTATCTACAAGAATCACTTGTTTGGGAATCCAAGCATAATCATATGTGAGCCTGAGATGTGTAGGAAAGTGTTGACAGATGATGAAAACTTCAAGCTAGGTTATCCAAAATCAATCAAAGAGTTGGCACGATGTAGGCCCATGACCGATGTGTCTCGTGCAGAACACAGGCATTTTCGGCGGCTAATAACCGCTCCCATTATTGGTCACAAGGCGCTAGCAATGTACCTAGAACGCATTGAGGACATTGTTACAAATTCGTTAGAAGAATTGTCTAGCATGAAGCACCCGGTTGAGTTGTTGAAGGAGATGAAGAAGGTGTCATTTAAAGCCATTGTTCACATTTTCATGGGCTCTTCTAATAACCAGCACGTCATTGAAAATATAGGCACTTCATTTACTGATTTATATAATGGCATGTTCTCTATCCCCTTCGAAGTACCCGGTTTCGCTTTCCACAAAGCACTCAAGGCTCGTGCAAAGCTGGCAAAGATAGTTCAACCTGTTGTGGATGAAAGGAGGTTGATGGCCAGAAATGGTGCAGAGGGAAACAATAAAGATCTCATTGATATTCTTTTGGAAGTCAATGATGAGGAGAATGGTCAGAAATTGAAGGATGAGGATATTATTGACATACTCATAGGATTTTTATTTGCTGGTCATGAAAGTTCTGCCACTGCTCTCATGTGGTCAATTGTGTATCTTACGCAACATCCCGACATCTTGAAAAAAGCCAAGGAAGAGCAGGAAGAAATCATGAAGACAAGAGTTCCGTCGCAGAACAGATTAAGTCTAAATGAAATCAAGCAAATGGTTTATCTTTCTCATGTAATTGATGAGACGTTGAGGTGTGCCAATATTGCGTTTTCAACTTTCCGAGAGGCTATTAATGACATGAACATCAATGGTTATATCATACCAAAAGGATGGAGAGTGTTAATTTGGGCAAGGGCTATTCATATGGATCCAAAATATTATCCAAATCCAGATGAATTTAACCCATCGAGATGGGATGATTACAATGCAAAGGCTGGAACCTTTCTACCTCTTGGAGCCGGAAGCAGGTTGTGTCCGGGAAGTGACTTAGCAAAACTTGAAATTTCCGTATTTCTTCATTATTTCCTACTTAACTACAAGTTGGAGCTAATAAATCCAGAATGTCCAGTTACTTGCTTGCCATCATCTAAGCCTATCGACAACTGTCTAGCTAAGGTGATAAAGGTGTCCAGCAATTAG 1488 0.4106 MELHWAWVSTATLATCYVFVAIFLRRLNGWYYDYDVKLTKKQLPLPPGDMGWPLIGNLISFIKDFSSGHPDSFINNLHLKYGRTGIYKNHLFGNPSIIICEPEMCRKVLTDDENFKLGYPKSIKELARCRPMTDVSRAEHRHFRRLITAPIIGHKALAMYLERIEDIVTNSLEELSSMKHPVELLKEMKKVSFKAIVHIFMGSSNNQHVIENIGTSFTDLYNGMFSIPFEVPGFAFHKALKARAKLAKIVQPVVDERRLMARNGAEGNNKDLIDILLEVNDEENGQKLKDEDIIDILIGFLFAGHESSATALMWSIVYLTQHPDILKKAKEEQEEIMKTRVPSQNRLSLNEIKQMVYLSHVIDETLRCANIAFSTFREAINDMNINGYIIPKGWRVLIWARAIHMDPKYYPNPDEFNPSRWDDYNAKAGTFLPLGAGSRLCPGSDLAKLEISVFLHYFLLNYKLELINPECPVTCLPSSKPIDNCLAKVIKVSSN* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4424 495 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4424 495 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4424 495 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4424 495 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4424 495 SUPERFAMILY Cytochrome P450 40 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4424 495 PANTHER CYTOCHROME P450 26 23 470 - -
Lja3g4424 495 PANTHER CYTOCHROME P450 88D6 23 470 - -
Lja3g4424 495 Pfam Cytochrome P450 46 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4424 495 Gene3D Cytochrome P450 35 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4424 495 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4424 495 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4424 495 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4424 495 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4424 495 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4424 Lja-Chr3 85597955 85601533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4424 24 492 Cytochrome P450 AT2G32440 49.467 2.37e-172 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4424 K04123 K17875 ag:BAG68929 797.734