Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4418 ATGGCTTCTTCCTCTGCTCCCAAACTCTACACCATCTTTCTGTGCATTTGTCTTGTGCTGCTCCTTTGCTCCACAATGGAGGTGGAAGCAAAAATTTGCCAAAGGCGTAGCAAAACATGGTCAGGGCCTTGTTTTAATACGGGAGGGTGCAAAAATCAGTGCATGAGAGTGGAGCATGGAACATTCGGCGCTTGTCACCGCCAGGGCTTTGGTTTTGCTTGCTTTTGCTACTTCAAGTGCTGA 243 0.4815 MASSSAPKLYTIFLCICLVLLLCSTMEVEAKICQRRSKTWSGPCFNTGGCKNQCMRVEHGTFGACHRQGFGFACFCYFKC* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4418 80 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
Lja3g4418 80 Gene3D - 32 80 IPR036574 -
Lja3g4418 80 PANTHER DEFENSIN-LIKE PROTEIN 1 3 80 - -
Lja3g4418 80 PANTHER DEFENSIN-LIKE PROTEIN 18-RELATED 3 80 - -
Lja3g4418 80 SUPERFAMILY Scorpion toxin-like 30 80 IPR036574 -
Lja3g4418 80 Pfam Gamma-thionin family 31 80 - -
Lja3g4418 80 SMART gth_4 32 80 IPR003614 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4418 1 80 Plant Defensins Gene Families AT1G19610 54.217 4.98e-23 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4418 - - mtr:MTR_8g012775 127.102