Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4409 ATGGGTTTTAAGAATAAGAAATTTAATTATTTAAGGGAAAGGATGAAAGAGATCGGCTCTGACATCGACTACTTTGTGCTGAAAAACTTTGAAGCTGAGAGAAAGGTCGAAGGACCTGGGCATGGTCGCAAGGTTGTGACACAATGTTACCCTTCATGTGGTGCAGGATGTGATGGTGGAACCATCTCCGGAACAGCTACTCGAGGAGGTTCCACTGTTACTGGCACAAATCCTGATCCACATAGATTAGGCATGGAAGGTGCTCAAGAGGATAGAGATAATGAGAGTGATGATGAAAGTGATGATGAGGAAGATACCCATACCTCTTCTAAGAAGGTGGATCAGGGAAAAAAGAGACCCAATGAATCTGCTTCAAAAACTCCAGTTTCTGCCAAGAAAGCCAAAAATGCAACTCCAGAAAAGACTGATGGTAAGAAAAATGTGCACACTGCAACTCCTCACCCTAAGAAGCAGGATGGAAAAACTCCCAACAGTTTTGGAAAGAATAAGAGTCCCAATTCTGGCGGAAAGTTCTCGAACAAAAGTGGTGGTAGCAAGCCTTTCAACTCCAACAAGGGTGGTCGTCAAAAGAAGTAA 597 0.4322 MGFKNKKFNYLRERMKEIGSDIDYFVLKNFEAERKVEGPGHGRKVVTQCYPSCGAGCDGGTISGTATRGGSTVTGTNPDPHRLGMEGAQEDRDNESDDESDDEEDTHTSSKKVDQGKKRPNESASKTPVSAKKAKNATPEKTDGKKNVHTATPHPKKQDGKTPNSFGKNKSPNSGGKFSNKSGGSKPFNSNKGGRQKK* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4409 198 MobiDBLite consensus disorder prediction 57 198 - -
Lja3g4409 198 MobiDBLite consensus disorder prediction 157 191 - -
Lja3g4409 198 MobiDBLite consensus disorder prediction 136 156 - -
Lja3g4409 198 PANTHER 32 KDA HEAT SHOCK PROTEIN-RELATED 85 191 - -
Lja3g4409 198 PANTHER HISTONE DEACETYLASE HDT3-LIKE ISOFORM X1 85 191 - -
Lja3g4409 198 MobiDBLite consensus disorder prediction 105 121 - -
Lja3g4409 198 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4409 Lja-Chr3 85374015 85388590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4409 124 193 C2H2 Transcription Factor Family AT5G03740 46.753 2.01e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4409 - - gmx:100795506 110.538