Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4408 ATGAATTTAGCTAACATGGATTCCCTTTCACCAGCAATAATTACAGGCTTTACAGCCATAGCCATAGCTCTAGTCCTTCTCTACAACATAAGAAGGGTGAAGAAAAAATCTAGCAACAAAATCAAAGGCCTAAAACCGCCAGAACCACCAGGTGGTTTACCTTTGATAGGTCACCTCCACCTACTAGGAAGTCAAACACCCCTTGCAAGAATCTTTGCTTCTTTGGCAGATAAACATGGTCCAATCTTCCAAATCCGTCTAGGAGCATATCCTGCTCTTGTTATTTGCAACCAAGAGGCAATCAAAGAGTGTTTCACCACAAACGACAAAGTCTTGGCCTCACGTCCAAAGTCAAGCCATGGAGTCTACCTTGGTTACAACTTTGCAGGGTTTGGATTTGCCTCTTATGGTGCTTATTGGATCAAGTTGAGAAAACTAACCATGCTTGAATTACTCTCTTCTCGCCGCCTTGAATCACTAAGGCATGTTTATGAATCCGAGATTGATACTTTGATCAAGGATCTATCTTTGTATGTTGGAGGTGTTGGACTTGGAAGTGCAGACCCAGAATATACACCTGGAGGCAAAATTTTGGTTAAGGTTGTGATGAATGAATGGTTGGAGCGCCTATCCTTCAACATAATCACAAAGATGATTGCGGGGAAGAGGTACTTTGAGTACTTGCAAGATGTGGATGATGAAGAAGCACATGGGATTGTGAAGCTTATGAAACAGTTCATGCACATATCTGGGGAGTTTGTTCCCTCTGATTTGATTCCACTTCTTGGATGGTTTGGTGTGCAAGGACATGTGCTTAAATCAATGAAGCGAATTGGGAGAGATTTGGACATGCTTGTTGGAAGCTGGGTTGAAGAGCATAAGAGCTTTGATCGCGTGAACATGCCGAGGGAGGAACATGATTTCATTGATGTCATGCTGGGTGTGATTGAAGATGATCCTGCTTCTGGCCATACCCGTGATACTATCATCAAGGCAAATATTATGAATCTAATGTTAGCGGGATCAGACACAACATCCACAACAATGACATGGATCCTAGCCATATTGTTGAAAAATAAGCACGCTTTGAAGCGTGCACAAGAGGAGATTGATCATCATGTAGGTAGGAACAGAAGGGTGGAAGCCTCAGACATAAAAAACCTGGTTTATCTTCAAGCCATTCTAAAGGAAACACTGAGGTTATACCCACCAGGGCCTCTATTGGTACCCCATGAAGCAACAGAAGATTGCAATATTCATGGCTATTATGTGCCAAAAGGAACACGTGTGTTTGCCAATGTATGGAAACTGCATAGAGATCAAAGCATTTGGTCAGAGCCTGAGAAGTTTTCACCTGAGAGGTTTATCAATGACAATGGAGAACTTGATGAAGGTCACCATTTTGAGTACCTTCCTTTTGGATCAGGGAGAAGAGCTTGTCCTGGATCTACATTTGCCACACAAGTGAGTCTCATGACACTTGCTCGTTTGCTTCAAGGATTTGATTTGGAGGTGCCAATTGATGAACCTGTTGATATGAGAGAAGGGTTGGGTATAACCTTGCCCAAGCTAACTCCATTGCAAATTCTTGTGACCCCTCGACTACAAACTGAACTTTATGATCAGTGA 1629 0.426 MNLANMDSLSPAIITGFTAIAIALVLLYNIRRVKKKSSNKIKGLKPPEPPGGLPLIGHLHLLGSQTPLARIFASLADKHGPIFQIRLGAYPALVICNQEAIKECFTTNDKVLASRPKSSHGVYLGYNFAGFGFASYGAYWIKLRKLTMLELLSSRRLESLRHVYESEIDTLIKDLSLYVGGVGLGSADPEYTPGGKILVKVVMNEWLERLSFNIITKMIAGKRYFEYLQDVDDEEAHGIVKLMKQFMHISGEFVPSDLIPLLGWFGVQGHVLKSMKRIGRDLDMLVGSWVEEHKSFDRVNMPREEHDFIDVMLGVIEDDPASGHTRDTIIKANIMNLMLAGSDTTSTTMTWILAILLKNKHALKRAQEEIDHHVGRNRRVEASDIKNLVYLQAILKETLRLYPPGPLLVPHEATEDCNIHGYYVPKGTRVFANVWKLHRDQSIWSEPEKFSPERFINDNGELDEGHHFEYLPFGSGRRACPGSTFATQVSLMTLARLLQGFDLEVPIDEPVDMREGLGITLPKLTPLQILVTPRLQTELYDQ* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4408 542 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 Pfam Cytochrome P450 47 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 Coils Coil 363 383 - -
Lja3g4408 542 Gene3D Cytochrome P450 39 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 PANTHER CYTOCHROME P450 FAMILY PROTEIN 21 540 - -
Lja3g4408 542 SUPERFAMILY Cytochrome P450 46 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4408 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Lja3g4408 542 PANTHER CYTOCHROME P450 82C3-RELATED 21 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4408 Lja-Chr3 85364530 85367608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4408 47 540 Cytochrome P450 AT4G31940 48.016 2.24e-164 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4408 - - gmx:100790675 779.63