Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4407 ATGGATCCTGATCCTGCTTCTTATGACCAATTTCTTGTAGAAATTTTAGCCTTATTGATTGTGTACATTTTGTTCAAATACATTAGATCTTCCTATGGATCTAAAAAAGGAAGTAGCTTGCAAAACAAAATACCCGAACCACATGGTTCTTTACCTTTCATAGGTCATCTCCATCTATTGAATGCTCAAGTACCATATTTTAGAACCTTCTCAGCCATGGCTCAGAAGTATGGCCCAATTTTCTCGCTCAGACTCGGTTGCCACAACACCATTGTGGTGAATACCCGCGAAATTGCGAAACAGTTCCTCACAACAAATGACAAAGTTTTCGCCTCAAGGCCCGACACAGCCGCCGGAAGATACATGGGTTACAACAATGCAGTTCTCGGTCTCGCCCCATATGGCAATTACTGGCGTGAAATGAGAAAAATTGCCACTCTTGAGGTTTTATCAAATCACAGGCTTGAAAAGCTTAAGCATGTGAGGGACACGGAGATATATTCTCTTGTCAAAGATTTGTCCTCATTTTCAAAAAACATGAATGACTCAATTCAAGTGCCTATAAGTGAGTTATTTGAGCACATGACATTCAACATAATTGTGAGGATGATTGCCGGGAAGCGATTTAGCGGCGAAACCATCAGCCAAGAAGATAGTGAATCATGGAGGCTAAGGAGGGCAATTAGAGATGCCACATATCTCAGTGGTGTTTTTGTGGCGGCTGATGCTATTCCTTGCCTTGGATGGTTTGATTTTGGAGGGTATGTGGGTTTCATGAAGAGAACCGCTAGGGAAATTGACATTATTCTTGATAAATGGATGCATGAACATTTGAGAAAGAGAGCTGAGATTAAGAATGATGGATGTGAAGATGATTTCATGGATGTGTTGATATCAACGTTCCAAGAGCACGATGTGATTTGGAGCCACAAGAAGGAAACAGTTATCAAAGCAACAGCACTGATCCTTATCCTTACAGGCTCAGGAAGCACAGCCATAACACTAACATGGGCACTTTCCTTGCTCTTAAACCATCCAAGGGTCCTAAAGGCTGCACAACAAGAGCTAGACACCAACATAGGAAAAGACAAATGGGTGCAAGAATCTGACATCAAAGACCTCAAATATCTCCAAGCCATTGTCAAAGAGACCCTTCGTCTATACCCACCAGCACCCTTAACAGGAATAAGGGAAGCCACTGATGATTGCCAAGTGGCAGGCTACCAAGTCCCAAAAGGGACTCGTTTGCTTATTAACCTGTGGAAGTTGCAAAGGGACCCTCAGATATGGTCCAACCCTGATGAGTTTCAACCTGAGAGGTTCCTCAATGCTCATGAAGATATCAGTTTTCAGAGTCAGGACTTTGGGTTTATCCCATTTAGCTTTGGAAGAAGGTCATGCCCTGGTATGAATTTTGGGCTGCAAGTGCTGCACTTGACTCTAGCTCGTTTGCTTCAAGGGTTTGATATATGCACAAAAGCTGGTGTTGTTGATATGATTGAAGGATTAGGAGTGGCCTTGCCTAAGGCTAATGCACTTGAAGTTGTGCTTGAACCACGTCTCCCATTGAAGCTTTATGAAAGCCTTTAA 1590 0.427 MDPDPASYDQFLVEILALLIVYILFKYIRSSYGSKKGSSLQNKIPEPHGSLPFIGHLHLLNAQVPYFRTFSAMAQKYGPIFSLRLGCHNTIVVNTREIAKQFLTTNDKVFASRPDTAAGRYMGYNNAVLGLAPYGNYWREMRKIATLEVLSNHRLEKLKHVRDTEIYSLVKDLSSFSKNMNDSIQVPISELFEHMTFNIIVRMIAGKRFSGETISQEDSESWRLRRAIRDATYLSGVFVAADAIPCLGWFDFGGYVGFMKRTAREIDIILDKWMHEHLRKRAEIKNDGCEDDFMDVLISTFQEHDVIWSHKKETVIKATALILILTGSGSTAITLTWALSLLLNHPRVLKAAQQELDTNIGKDKWVQESDIKDLKYLQAIVKETLRLYPPAPLTGIREATDDCQVAGYQVPKGTRLLINLWKLQRDPQIWSNPDEFQPERFLNAHEDISFQSQDFGFIPFSFGRRSCPGMNFGLQVLHLTLARLLQGFDICTKAGVVDMIEGLGVALPKANALEVVLEPRLPLKLYESL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4407 529 PANTHER CYTOCHROME P450 82C3-RELATED 11 527 - -
Lja3g4407 529 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Lja3g4407 529 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 PANTHER CYTOCHROME P450 82G1 11 527 - -
Lja3g4407 529 Pfam Cytochrome P450 45 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 Gene3D Cytochrome P450 31 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4407 529 SUPERFAMILY Cytochrome P450 44 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4407 Lja-Chr3 85358230 85362424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4407 45 526 Cytochrome P450 AT4G31970 48.790 6.92e-166 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4407 K17961 - gmx:100787489 777.704