Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4391 ATGGCAAATTTCAGCTATTCAATGAAGGCATTTTCAATTTTCCTCTTCTTCCTCCTCGCTTCAGCATTAGTTTCTGCGAAGAAAACTGCTGATGTAACGGAGTTGCAGATCGGTGTGAAGTATAAACCTACATCATGTGAAGTTCAGGCACACAAAGGTGATAAAGTCAAAGTACACTATCGGGGAAAACTCACTGATGGAACTGTTTTCGATTCTAGCTTTGAAAGAAATAGTCCAATCGATTTTGAACTTGGCAGTGGTCAAGTGATAAAGGGGTGGGACCAAGGATTACTAGGAATGTGTTTGGGTGAGAAGCGTAATCTCAAAATACCAGCAAAACTTGGCTATGGGGAGCAAGGTTCCCCACCCACTATTCCAGGTGGTGCAACACTGGTATTTGACACTGAGCTTGTGGGAGTGAACGACAAAAGTCTTCACGAAGAGACACCAGACTCCGAACTGTAG 465 0.4344 MANFSYSMKAFSIFLFFLLASALVSAKKTADVTELQIGVKYKPTSCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERNSPIDFELGSGQVIKGWDQGLLGMCLGEKRNLKIPAKLGYGEQGSPPTIPGGATLVFDTELVGVNDKSLHEETPDSEL* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4391 154 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 53 141 IPR001179 GO:0003755
Lja3g4391 154 PANTHER - 8 146 IPR044609 GO:0000413|GO:0003755|GO:0061077
Lja3g4391 154 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP15-2 8 146 - -
Lja3g4391 154 SUPERFAMILY FKBP-like 34 145 - -
Lja3g4391 154 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 138 IPR001179 GO:0003755
Lja3g4391 154 Gene3D - 20 153 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4391 Lja-Chr3 85166839 85172082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4391 54 154 Calmodulin-binding Proteins AT3G25230 31.132 6.12e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4391 K09569 - gmx:100305479 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2053 1 23789187 23796425 Lja3g4391 3 85166839 85172082 PCT