Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4385 ATGATCCTGCTTGCTCCTGAGCACCCTCTCCCTGCTTGCTACCATGACTGCTGGGCTGCCCTCCAATGGGTATCCTCCCATTCCACCAAAACCCTTACCAACACAGACCCATGGTTGATTGACCATGATGATTTCAACAGAATTTTCATAGGTGGTGATAGTGCTGGTGGTAACATTGTGCATAACATCGCCATGCATGCAGGGATTGAGGTTTTACCAGGTGATATTAAACTCTCAGGAGCATTCATAGTTCATCCCTTCTTCAACAAGCCTGAACAGAACATTGACCACAAGATTTGGAGTCTGGTGTATCCATCCGCACCAGGTGGTGTTGATAATCCCATGCTCAACCCTGTGGGTCCTGGTGCACCTAGTTTGGCTACACTTGGATGCTCTAGAATCATTGTGTGTGTTCCTAGCAAGGATAGATTAAAGGACAGAGCTGTTAGGTATTATGAAGCTATGAATAAAAGTGGATGGCAAGGGAAACTGGAGTTGTTTGAAGAGGAAGATGAGGATCATATTTATCATTTGTTCAAGCCAGAATCTGAGAGTGCAAAAAGTTAA 567 0.448 MILLAPEHPLPACYHDCWAALQWVSSHSTKTLTNTDPWLIDHDDFNRIFIGGDSAGGNIVHNIAMHAGIEVLPGDIKLSGAFIVHPFFNKPEQNIDHKIWSLVYPSAPGGVDNPMLNPVGPGAPSLATLGCSRIIVCVPSKDRLKDRAVRYYEAMNKSGWQGKLELFEEEDEDHIYHLFKPESESAKS* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4385 188 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 3 187 - -
Lja3g4385 188 Pfam alpha/beta hydrolase fold 4 177 IPR013094 GO:0016787
Lja3g4385 188 Gene3D alpha/beta hydrolase 3 188 IPR029058 -
Lja3g4385 188 PANTHER ARYLACETAMIDE DEACETYLASE 3 187 - -
Lja3g4385 188 SUPERFAMILY alpha/beta-Hydrolases 4 182 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4385 Lja-Chr3 85131636 85133287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4385 5 187 Carbohydrate Esterase AT1G19190 37.306 4.27e-42 142