Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4362 ATGCAATCACACCCAAAACCTTGTCTTCAGTTATTCCCCATTGAAGCAAGCAAATTAATCATGTTACCTCTAGCATTGGCTATACCTGCGTTGCAGCTCCTTCTGATAATACTTTTCATTCTATCAGTTGCCCAGCTTCTTAATCCAAAAGAGCATAAAAATGGTAGGAAATATCCACCAGGTCCCAAACCTCTGCCAATTATAGGCAACCTCCACCTGCTGGGTAAACTCCCACACCTCTCCATTCACGAGCTTGCCAAAAAATATGGACCCATCATGTCCTTAAAGCTAGGACAGGTCCCAACCATTGTGGTTTCGTCCCCTGAAACAGCAGAGCTAATCCTCAAGACCCATGACTCTGTTTTTGCTAGCAGACCTTTAACTCAAGCATCCAAATACATTTGCTATGACAGTAAGGGCTTGATTTTCTCTGAGTACGGTTCCTACTGGCGCAATGTGACGAAGCTGTGCACCTTTGAGCTCTTAAGCGTGAATAAAGTTCAAAGTTTTGCTCCTTTAAGGAGTGAGGAAGTACGAGTGTTTGTGAAATCACTTGAGAAATCAGCAGCCTCACGCGAGGTTGTGAATGTCAGTAAGAGAGTTGGGGAACTTGTAGAGAATGTTGTCCAGAAAATGATTTGGGGTCCCAGTAACATTGAAAATTTTGATGTCAAAAGGCTTGTTCATGACGTTCTGCACCTCATGGGAGTTTTTGATGTGGGAGATTATATACCTTGGGTTGGGGCATTTGATCTTCAGGGACTAGTAAGAAAGTTCAAGAAAGCGCACGAGGAATTTGATCAAATGTTAGAGCAAATCATCAAAGATCATGAGGCTCCTTCTCGTCTTAGCGACCAGAAAAACGGGCAATCTATTGACTTCACTGACACATTGCTATCACATATGAAGCAATCAAAGGACAAACATATTATTAACAAAACAAATCTCAAGGCTATTTTGTTGGATATTATTATCGGATCACTTGACACAACTATCATGACGACTGATTGGGCTATGTCAGAACTACTGAGGCACCCGAAGGCTATGACGAAACTTCAAGATGAGTTAAAGAATGTAGTGGGTATGGGGAGGGTGGTAGAAGAAGATGACATACCAAAGTTGCCATACCTCAATATGGTGGTGAAAGAGACCTTTAGGATACACCCACCTGCACCCCTCCTCGTACCTCGCGAGTGTTTGGAAGATATAACAATCAATGGTTATTTCATTGCGAAAAAGTCACGGGTTTTAGTCAATTCTTGGACAATAGGACGAGATCCTAAAATTTGGTCAGATAATGCTGAGGATTTTTATCCAGACAGATTTCAAAACACCGACACAGATTCTCATGGACTCCATTTTCAATTTCTACCATTTGGTTCCGGTCGTAGACGCTGTCCCGGGATGCAATTGGGTTTAACTACCGTTCCGTTGGTTCTAGCTCAGTTAGTGCATTGCTTCAATTGGGAGCTTCCATTGGGCATGTCTGCCAATGACTTAGACATGACGGAGGAATTTGGCCTTACAACGCCAAGAGTTCAAAATTTGCTAGCGATTCCAACTTATCGCTTAGTAAATGAAGGTAATTGA 1590 0.4239 MQSHPKPCLQLFPIEASKLIMLPLALAIPALQLLLIILFILSVAQLLNPKEHKNGRKYPPGPKPLPIIGNLHLLGKLPHLSIHELAKKYGPIMSLKLGQVPTIVVSSPETAELILKTHDSVFASRPLTQASKYICYDSKGLIFSEYGSYWRNVTKLCTFELLSVNKVQSFAPLRSEEVRVFVKSLEKSAASREVVNVSKRVGELVENVVQKMIWGPSNIENFDVKRLVHDVLHLMGVFDVGDYIPWVGAFDLQGLVRKFKKAHEEFDQMLEQIIKDHEAPSRLSDQKNGQSIDFTDTLLSHMKQSKDKHIINKTNLKAILLDIIIGSLDTTIMTTDWAMSELLRHPKAMTKLQDELKNVVGMGRVVEEDDIPKLPYLNMVVKETFRIHPPAPLLVPRECLEDITINGYFIAKKSRVLVNSWTIGRDPKIWSDNAEDFYPDRFQNTDTDSHGLHFQFLPFGSGRRRCPGMQLGLTTVPLVLAQLVHCFNWELPLGMSANDLDMTEEFGLTTPRVQNLLAIPTYRLVNEGN* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4362 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Lja3g4362 529 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4362 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4362 529 PRINTS E-class P450 group I signature 110 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4362 529 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4362 529 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4362 529 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4362 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4362 529 Gene3D Cytochrome P450 46 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4362 529 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 44 523 - -
Lja3g4362 529 Pfam Cytochrome P450 59 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4362 529 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 44 523 - -
Lja3g4362 529 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4362 529 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4362 529 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4362 529 SUPERFAMILY Cytochrome P450 59 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4362 Lja-Chr3 84609716 84612985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4362 56 520 Cytochrome P450 AT3G26330 41.176 2.02e-127 380