Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4360 ATGGGAGTTCTTGATCTGGGAGATTATATACCTTGGGTTGGGGCCTTTGATCTTCAGGGACTTGTACGAAGGTTCAAGAAAGCGCACAAGAAATTTGACGAAGTGTTAGAGATAATCATCAAAGATCACGAGGCTTCTGCTCGCCTTACCGACCAGAAAAGCGTGCAATCTATTGACTTCATTGACATATTGCTATCACATATGCACCAATCAAAGGATAAACATGCTATTACCAAAACAAACATCAAGGCTATTTTGTTGGATATAATTATCGGAGCAGTTGACACAACTATCATGTCGGTTGATTGGAATATGGCAGAACTAATAAGGCACCCAAGGGTTATGAAGAAACTTCAAGATGAGTTAAAGAATATTGTAGTGGGTATGGGGAGGATGGTAGAAGAAGCTGACTTACCAAAGTTGCCATACCTCGATATGGTGATGAAAGAGACCTTTAGGTTACATCCACCTACTCCACTCCTCCCACCTCGTGAGTGTACGGAAGATTTTACAATCAATGGTTATTTCATTGCGAAAAAGTCACGAGTTTTAGTCAACTCTTGGACATTAGGACGAGATCCTAAGATGTGGTCAGATAATTTTAAGGATTTTTATCCAGAAAGATTTCATAACACCGACATAGATTCTCATGGGCACAATTATCAATTTTCACCATTTGGTTCCGGTCGTAGACGCTGTCCCGGGATGCTATTGGATTTAACTACGGTTCCGTTTCTTCTAGCTCAGCTAGTGCATTGCTTCAACTGGGAGCTTCCACCGGGCGTGTCTACTGATGACATGGACATGACTGAGGAATTTGGCCTTACAACGCCAAGAACTCAGAATTTGCTAGCGATTCCAACTTATCGCTTAATAAATGAAGGTTAA 888 0.4133 MGVLDLGDYIPWVGAFDLQGLVRRFKKAHKKFDEVLEIIIKDHEASARLTDQKSVQSIDFIDILLSHMHQSKDKHAITKTNIKAILLDIIIGAVDTTIMSVDWNMAELIRHPRVMKKLQDELKNIVVGMGRMVEEADLPKLPYLDMVMKETFRLHPPTPLLPPRECTEDFTINGYFIAKKSRVLVNSWTLGRDPKMWSDNFKDFYPERFHNTDIDSHGHNYQFSPFGSGRRRCPGMLLDLTTVPFLLAQLVHCFNWELPPGVSTDDMDMTEEFGLTTPRTQNLLAIPTYRLINEG* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4360 295 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 291 - -
Lja3g4360 295 Pfam Cytochrome P450 7 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4360 295 Gene3D Cytochrome P450 1 286 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4360 295 PRINTS P450 superfamily signature 92 109 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4360 295 PRINTS P450 superfamily signature 146 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4360 295 PRINTS P450 superfamily signature 224 233 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4360 295 SUPERFAMILY Cytochrome P450 5 290 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4360 295 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 226 235 IPR017972 GO:0005506|GO:0016705
Lja3g4360 295 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 291 - -
Lja3g4360 295 PRINTS E-class P450 group I signature 145 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4360 295 PRINTS E-class P450 group I signature 81 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4360 295 PRINTS E-class P450 group I signature 223 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4360 295 PRINTS E-class P450 group I signature 233 256 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4360 295 PRINTS E-class P450 group I signature 101 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4360 Lja-Chr3 84558769 84560701 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4360 2 291 Cytochrome P450 AT5G07990 44.218 9.75e-78 243