Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4359 ATGGACTCTTATTTGATTCCTGCGGCCAATCTGTACAAGGATTGCTTTGTTGCCATAAGTCGTCCACACGAAACATCCACTCTAATTCCTCAAGACTTTGTTTCCAAATATGAAGATGAACTGAGTTTTGTTTTTAGCTTCGCTGATCCTTTTGGAAATAACCACAAAGTTCGCTATGAAAAAGTCTTGGACAAACATCTGCTGACGGATGGATGGAATGAGATTCTTGATCCTCCTTTTCTTATTGATGCCCGCCTAACAATTCCTTTTCCGGATCGTTCTCATTTCTTAGAAGCTGGCTATCCTTGTGCTTTTGTTTTCCAATTGACTATATACCAATCTAAAGCTAGCCAACTGGCTCTTCCAAGACATGCTGCTGATTTTGTTCATAGGTGTGGTGTATTTAGATGGACTCTTAGAGAACTAGAAGATGCTGAAGTTGTTTGCTCTCTTCTTGCTCCACCAGGAGCCAGGAGACTTGACTTGGATGGCCATAGGAGCAAAATCATGAAAGCTATGAGGATCATGAGGAAGTATCATGATCCCATTATTGATGATAGAATCAAACAGTGGAATGATGGCTTGAAGACCGTTGAAGAAGACTTACTGGACGTGTTGATCAAACTCAAGGATGCCAACAATATACCATTACTCACATTGAAGGAACTCAAGGAGCAAATTATAGAATTGGCGATTGAAATGGTGGACAATCCATCAAATGCTTTTGAATGGGCACTAGCAGAAATGATAAACCAACCTGAGTTGCTCAAACGAGCCACTGAAGAATTGGACAATGTAGTTGGCAAAGAGAGGCTTGTCCAAGAATCAGAAATTCCTAAGCTCCAATTTGTTAAAGCTTGCGCAAGAGAAGCTCTTCGACTTCACCCCATGGAGTATTTCAATGTTCCCCATCTTTGCATGAATGACACAATGGTCGGTGACTACTTGTTCCCAAAAGGAACTCAAGTACTACTAAGTAGAGTTGCTCTTGGTAGAAACCCAAAATTCTGGACTGATCCCCTCAAGTTCAACCCGGAACGCCATCTCAAGGAGGGTATTGATGTGGTTTTGACAGAGCCAGATTTGAGGTTCATTTCCTTTACCACAGGAAGACGTAGTTGTCCTGGAGTAGCACTTGGCACCACATTGACTGTAATGTTATTTGCTAGGATGCTTCATGGCTTCAGCTGGAGTCCACCACCAAACGTATCAAGCATCGATCTTGTCCCGTCCAAAGATGATCTCTTTCTAGCTAAGCCACTTTTACTTGTGGCAAAACCAAGATTGGCTGCAGAACTCTATCGAACTAATGAAATTTAA 1320 0.4189 MDSYLIPAANLYKDCFVAISRPHETSTLIPQDFVSKYEDELSFVFSFADPFGNNHKVRYEKVLDKHLLTDGWNEILDPPFLIDARLTIPFPDRSHFLEAGYPCAFVFQLTIYQSKASQLALPRHAADFVHRCGVFRWTLRELEDAEVVCSLLAPPGARRLDLDGHRSKIMKAMRIMRKYHDPIIDDRIKQWNDGLKTVEEDLLDVLIKLKDANNIPLLTLKELKEQIIELAIEMVDNPSNAFEWALAEMINQPELLKRATEELDNVVGKERLVQESEIPKLQFVKACAREALRLHPMEYFNVPHLCMNDTMVGDYLFPKGTQVLLSRVALGRNPKFWTDPLKFNPERHLKEGIDVVLTEPDLRFISFTTGRRSCPGVALGTTLTVMLFARMLHGFSWSPPPNVSSIDLVPSKDDLFLAKPLLLVAKPRLAAELYRTNEI* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4359 439 SUPERFAMILY DNA-binding pseudobarrel domain 26 75 IPR015300 -
Lja3g4359 439 SUPERFAMILY Cytochrome P450 151 428 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4359 439 Gene3D Cytochrome P450 107 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4359 439 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 157 434 - -
Lja3g4359 439 Pfam Cytochrome P450 141 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4359 439 PRINTS E-class P450 group I signature 285 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4359 439 PRINTS E-class P450 group I signature 326 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4359 439 PRINTS E-class P450 group I signature 364 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4359 439 PRINTS E-class P450 group I signature 374 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4359 439 PRINTS E-class P450 group I signature 242 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4359 439 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 157 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4359 Lja-Chr3 84340059 84352873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4359 160 436 Cytochrome P450 AT4G39950 58.123 1.22e-110 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4359 - K12153 lja:Lj3g3v0755150.1 559.681