Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4358 ATGGCTTTGGATACTCTCCTCTCATGGTCAACCACCGAGCCATTTACAATCCCAGCCACATTGTTGTTTTTCTTTTTCCTTCTTTTCTGGTCACTCAAGAAAAGAAGCCAACCTAACACACCCAAAAAGGCAAACCCGCCACCGGAAGCTGGCGGTGCATGGCCTTTTATCGGCCACCTCCCCCTCTTAGGTGGGTCCCAACCACCTCACATCACGTTGGGAAGCCTGGCTGATAAATACGGACCCATCTTCACCTTGCGTTTAGGTGCTCATCGAGCTTTGGTGGTGAGCAACTCAGAATTAGCCAAAGAGTGTTTTACAGTAAACGACAAAGCGTTTGCTACTCGTCCCAAAACTTTAGCCAATGAAATTGTGGGTAAAAACTTATTTGGTTTCTTACCCTACGGTTCATATTGGCGTGACGTGAAAAAGATAGCCACAGTGGAAGTCCTTTCCGCCAAACGCACGGAGATGCTGAAGCATGTGATGGAACAGGAGGTGAAGGCAGCAATGAAAGATAGCTATGATTCTTGGGCAAAGATGAAGGAGAGTGGTAGTGAAAAAGTGGTGGTTACTGAGATGGAGAAATGGTTTGCGGACATAACACTGAATGTGGTGTTCAGAACGGTGTTAGGAAAACGCCTAGTTGCGAGAATGGGTAGTGATGGGAATGAGGAAGAGAACAAAAAGATTCGGGACGTAGTTAGGGAATTCTTTCGTCTCATGGGGTTATTTACTGTTTCCGATGCTCTACCATATTTAAGATGGTTGGATTTGGATGGTGAGGAGAAGAAAATGAAAAAAACATCTAAAGAATTAGATGACCTTGCTACGGTTTGGCTTGAGCAACACAAACAAAAGAGAAAGAATAATGGTTCAGGGGAATGGAAAAAGGGTGAATATGACTTTATGGATGTGTTTCTTTCAATTGTAGATGATGAAGGTTTCCATGGTCATGATGGTGATACCATAATAAAAGCGACATGTCTGCAACTAATTTTGGCCGGCACAGATACTACGACGGCAACATTAACTTGGGCTATCTCTTTACTTCTCAACAATCGTGAAGCCCTAAACAAGGCCACACATGAGATAGACACACAAATGGGAGGAAGAACTAAGATAGTGGAATCAGACTTGGAGAAATTTGTGTATCTTCAAGCCATTATTAAGGAAACATTGCGCTTATACACAGTCGTTCCGTTAAATGTGACTCACATGTCTATGGAAGATTGTGTTGTGGGTGGATACCATGTGCCCGCTGGCACGCATCTCCTGACTAACATTTCAAAAATTAACCGAGATCCTTCAATATATTCTGATCCAATGGAGTTTCGTCCAGAGAGATACCTCACAACCCATAAAGACCTTGATCTGAAGGGCAAAAATTTTGAGTTCATCCCATTTGGTTCAGGCAGAAGAATATGTCCAGGAATCTCTTTCGCTCTTCAACTGATTAAAATGACACTTGCTACATTATTGCATGGGTTTGATATCGTGACTCTTGATGGAGGACCAGTTGATATGGTTGAAATGTCCGGGTTAACCAACAGCAATGCTTCTCCAGTCCAAGTCATTCTTACACCACGGCAATCTAACCAAGTTTACAGTCAAAATTAA 1620 0.429 MALDTLLSWSTTEPFTIPATLLFFFFLLFWSLKKRSQPNTPKKANPPPEAGGAWPFIGHLPLLGGSQPPHITLGSLADKYGPIFTLRLGAHRALVVSNSELAKECFTVNDKAFATRPKTLANEIVGKNLFGFLPYGSYWRDVKKIATVEVLSAKRTEMLKHVMEQEVKAAMKDSYDSWAKMKESGSEKVVVTEMEKWFADITLNVVFRTVLGKRLVARMGSDGNEEENKKIRDVVREFFRLMGLFTVSDALPYLRWLDLDGEEKKMKKTSKELDDLATVWLEQHKQKRKNNGSGEWKKGEYDFMDVFLSIVDDEGFHGHDGDTIIKATCLQLILAGTDTTTATLTWAISLLLNNREALNKATHEIDTQMGGRTKIVESDLEKFVYLQAIIKETLRLYTVVPLNVTHMSMEDCVVGGYHVPAGTHLLTNISKINRDPSIYSDPMEFRPERYLTTHKDLDLKGKNFEFIPFGSGRRICPGISFALQLIKMTLATLLHGFDIVTLDGGPVDMVEMSGLTNSNASPVQVILTPRQSNQVYSQN* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4358 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Lja3g4358 539 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 Gene3D Cytochrome P450 40 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 Coils Coil 259 279 - -
Lja3g4358 539 Pfam Cytochrome P450 50 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4358 539 PANTHER CYTOCHROME P450 46 536 - -
Lja3g4358 539 PANTHER CYTOCHROME P450 82C3-RELATED 46 536 - -
Lja3g4358 539 SUPERFAMILY Cytochrome P450 52 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4358 Lja-Chr3 84327523 84330908 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4358 48 536 Cytochrome P450 AT4G31940 49.598 3.65e-170 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4358 - - gmx:100778017 648.277