Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4357 ATGGGTTTCAATAATCTCCTCTCAGAGTCAATGGAGCCATACACAATCTATGCCACGCTGATCTTTCTCTTTTGCCTTCTTTTTTGGTTACTGAAGAGAAGCCATGCTGACATAACCACAAAGGCACCACCGCCACCAGAAGCTGAGGGTGCATGGCCTTTGATCGGCCACCTCCACCTCTTAGGTGGATCTCATGCAGCTCATGTCATCTTGGGTGACATGGCCGACAAATATGGACCCATCTTCACCTTTCGTTTAGGTGTTCATCGAACTTTGGTGGTTAGCAACTGGAAAATGGCAAAAGAGTGTTTAACCGTGAACGACAAAGTGTTTGCTTCCCGTCCCAACTCTTTAGCCAATGAAATTTTGGGCTTCAACTTCTCATTGTTTGGTACCAGCCCCTACGGCCCCTATTGGCGCTACGTGCGTAAGATAGCCACACTAGAGGTCTTGTCCACCAAACGCATAGAAATGCTCAAGCAAGTGATGCACTCGGAGGTGAAGGCAGCAATGAAAAAAAGCTATGATTATTGGATAATGATGAAGGAGAGTGGTGATAAAAAACCGGTTACTGAATTGGAGAAATGGTTTGCAAACATAGCACTAAACGTTATGTTCAGAACAGTGTTGGGAAAACGGTTAACTGGGATAGGTTGTGAAGATGACGAGGAAGAGAACGAAAAGATTAGGAAATCAGTTAGAGAGTTCTTCCATCTCTTTGGGCAGTTTACTGTTTCTGATGCGGTGCCGTTTTTGAGATGGTTGGATTTGGATGGACATGAGAGGAAAATGAAGAAGTTAGCCAAAGAATTGGATGACTACACTCAGGTTTGGCTTGAGCAACACAAACGCAACAGAAATAGTGGTTCAAGCGAATTGAAAAAGGGTGAACATGACTTCATGGACTTGCTTCTTTCCACCGTTGATGATGAGTGCCTACAGTACGGTCATGATGCTGATACCATAGTAAAATCTACATGTCTGCAATTAATTTTAGCTGGCACAGACACTATGACAGGGACATTAACTTGGGCTCTCTCCTTACTTCTCAACAACCGTGAAGTCCTAAATAAGGCTACACATGAGTTACACACACAAATTAGTAGGGAAAATGTGGTAGTGAAATCAGACTTCGAGAAGTTGGAGTATCTACTGAAGGAAACATTATGCCTATACCCACCAGGACCATTAAGTGTGCCTCATGAGTCCATGGAAGATTGTATCGTGGGTGGATACCATGTTCCTGCTCACACGCGTCTCTTGACTAATATTTCAAGACTTCAACAAGATCCTTCACTATATTCTGATCCATTGGAGTTTCGCCCAGAGAGATTCCTCACAACCCATAAGGACATTGATCATAAGGGAAAACATTTTGAGTTCATCCCATTTGGTGCAGGTAGAAGAATATGTCTTGGAATCTCTTTCGCTCTTCAGCTAATGCAAATGACACTTGCTACTCTATTGCATGGATTTGAAATAGTAACTATTGATGGAGGACCTGTGGATATGGTTGAAAAAACCGGGTTAACCAACGTTAAAGCTTCTCCACTCCAAGTCATTCTTACACCACGTCAATCCAACCAAGTTTACAATCAAAATTAA 1605 0.428 MGFNNLLSESMEPYTIYATLIFLFCLLFWLLKRSHADITTKAPPPPEAEGAWPLIGHLHLLGGSHAAHVILGDMADKYGPIFTFRLGVHRTLVVSNWKMAKECLTVNDKVFASRPNSLANEILGFNFSLFGTSPYGPYWRYVRKIATLEVLSTKRIEMLKQVMHSEVKAAMKKSYDYWIMMKESGDKKPVTELEKWFANIALNVMFRTVLGKRLTGIGCEDDEEENEKIRKSVREFFHLFGQFTVSDAVPFLRWLDLDGHERKMKKLAKELDDYTQVWLEQHKRNRNSGSSELKKGEHDFMDLLLSTVDDECLQYGHDADTIVKSTCLQLILAGTDTMTGTLTWALSLLLNNREVLNKATHELHTQISRENVVVKSDFEKLEYLLKETLCLYPPGPLSVPHESMEDCIVGGYHVPAHTRLLTNISRLQQDPSLYSDPLEFRPERFLTTHKDIDHKGKHFEFIPFGAGRRICLGISFALQLMQMTLATLLHGFEIVTIDGGPVDMVEKTGLTNVKASPLQVILTPRQSNQVYNQN* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4357 534 PANTHER CYTOCHROME P450 45 531 - -
Lja3g4357 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Lja3g4357 534 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 Pfam Cytochrome P450 47 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 Coils Coil 257 277 - -
Lja3g4357 534 PANTHER CYTOCHROME P450 82C3-RELATED 45 531 - -
Lja3g4357 534 SUPERFAMILY Cytochrome P450 46 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4357 534 Gene3D Cytochrome P450 30 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4357 Lja-Chr3 84256203 84269677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4357 20 531 Cytochrome P450 AT4G31940 46.552 4.43e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4357 - - gmx:100778017 658.292