Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4356 ATGTTAGAGCAAATCATCAAAGATCATGAGGCTTCTTCTCGTCTTAGCGACCAGAAAAGCAGGCAATCTATTGATTTCACTGACACATTGCTATCACATATGCACCAATCAAAGGACAAAAATATTATTAACAAAACCAACCTCAAGGCTATTTTGTTGGATATTATTCTCGGATCACTTGATACAACTATCATGACGGTTGATTGGGCTATGACAGAACTATTGAGGCAACCAAAGGCTATGACGAAACTTCAAGATGAGTTAAAGAATGTAGTGAGTATGGGGAGGCTGGTAGAAGAAGCTGACATACCTAAGTTGCCATACCTCCACATGGTCGTGAAAGAGACCTTAAGGATACACCCACCTGCTCCATTCCTCGTGCCTCGCGAGTGTAGTGAAGATATTACAATCAATGGTTACTTTATTGCGAAAAATTCACGAGTTTTAGTCAATTCGTGGACAATAGGACGGGATCCTAAAAGTTGGTCAGATAATGCTGAGAATTTTTATCCAGAAAGATTTCACAACACCGACATAGATTCTCATGGACTCCATTTTGAATTTCTACCATTTGGTTCAGGTCGTAGACGCTGTCCCGGAATGCAATTGGGTTTAACTACCGTTCCATTTATTCTAGCACAGTTAGTGCATTGCTTCAATTGGGAGCTTCCATTGGGCATGTCTACTGATGACTTGGACATGACTGAGGAATTTGGCCTTACAATTCCAAGAATTCAGGATTTGCTAGCGATTCCAACTTATCGCTTAATAAATGAAGGTTAG 783 0.4036 MLEQIIKDHEASSRLSDQKSRQSIDFTDTLLSHMHQSKDKNIINKTNLKAILLDIILGSLDTTIMTVDWAMTELLRQPKAMTKLQDELKNVVSMGRLVEEADIPKLPYLHMVVKETLRIHPPAPFLVPRECSEDITINGYFIAKNSRVLVNSWTIGRDPKSWSDNAENFYPERFHNTDIDSHGLHFEFLPFGSGRRRCPGMQLGLTTVPFILAQLVHCFNWELPLGMSTDDLDMTEEFGLTIPRIQDLLAIPTYRLINEG* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4356 260 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 255 - -
Lja3g4356 260 PRINTS P450 superfamily signature 111 122 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4356 260 PRINTS P450 superfamily signature 198 209 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4356 260 PRINTS P450 superfamily signature 58 75 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4356 260 PRINTS P450 superfamily signature 189 198 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4356 260 SUPERFAMILY Cytochrome P450 3 255 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4356 260 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 191 200 IPR017972 GO:0005506|GO:0016705
Lja3g4356 260 PRINTS E-class P450 group I signature 188 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4356 260 PRINTS E-class P450 group I signature 67 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4356 260 PRINTS E-class P450 group I signature 110 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4356 260 PRINTS E-class P450 group I signature 47 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4356 260 PRINTS E-class P450 group I signature 198 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4356 260 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 255 - -
Lja3g4356 260 Pfam Cytochrome P450 2 246 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4356 260 Gene3D Cytochrome P450 1 249 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4356 Lja-Chr3 84021975 84022757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4356 10 250 Cytochrome P450 AT1G33730 49.793 5.91e-77 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4356 - - lja:Lj3g3v0755620.1 430.639