Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4355 ATGCATCAAGCAATGCAATCACACCCAAAACCTTGTCTTCAGTTATTCCCCATTGAAGCAAGCAAATTAATCATGTTACCTCAAGCATTAGCTATACCTGCGTTGCTCCTTCTGATATTACTTTTCATTCTATCAGTTGCCCTGCTTCTTAATCCAAAAGAACATAAAAATGGTAGGAAATATCCACCAGGTCCCAAACCTCTGCCAATAATTGGCAACCTCCACCAGCTGGGTAAACTCCCTCACCGATCCATGCACGAACTTTCAAAAAAATATGGACCCGTCATGTCCTTAAAGCTAGGAAAGGTCCCAACCATTGTGATTTCATCCCCTGAAACAGCAGAGCTAGTCCTCAAGACCCATGACATTGTTTTTGCTAGCAGGCCTATAACTCAAGCATCCAAATACATTTGTTATGACAGTAAAGGCATAATTTTCACTGAGTATAATTCCTACTGGCGAAACATGATGAAACTGTGCATGTTTGAGCTCTTAAACATGCCGAAAGTTCAAAGCTTTGCTCCTTTAAGGAGGGAGGAAGTAGGACTGTTTGTGGAATCACTTAAGAAATCAGCAGCCTCACGTGAGGTTGTGAATGTCAGTGAGAAAATTGGGGATGTTGTAGAGAATACTGTCCATAGAATGATTTGGGGTAAATTTGATGATAAATTTGGTGTAAAACAGCTTGCTCGTGACGTTCTGCTCCTCATGGGAGTTCTTGATCTGGGAGATTATATACCTTGGGTTGGGGCCTTTGATCTTCAGGGACTTGTACGAAGGTTCAAGAAAGCGCACAAGAAATTTGACGAAGTGTTAGAGATAATCATCAAAGATCACGAGGCTTCTGCTCGCCTTACCGACCAGAAAAGCGTGCAATCTATTGACTTCGTTGACATATTGCTATCACATATGCACCAATCAAAGGATAAACATGCTATTACCAAAACAAACATCAAGGCTATTTTGTTGGATATAATTATCGGAGCAGTTGACACAACTATCATGTCGGTTGATTGGAATATGGCAGAACTAATAAGGCACCCAAGGGTTATGAAGAAACTTCAAGATGAGTTAAAGAATGTAGTGGGTATGGGGAGGATGGTAGAAGAAGCTGACTTACCAAAGTTGCCATACCTCGATATGGTGATGAAAGAGACCTTTAGGTTACATCCACCTGCTCCACTCCTCCCACCTCGTGAGTGTACGGAAGATATTACAATCAATGGTTATTTCATTGCGAAAAAGTCACGAGTTTTAGTCAATTCTTGGACATTAGGACGAGATCCTAAAATGTGGTCAGATAATTTTGAGGATTTTTATCCAGAAAGATTTCATAACACCGACATAGATTCTCATGGGCACAATTATCAATTTTTACCATTTGGTTCTGGTCGTAGACGCTGTCCCGGGATGCTATTGGGTTTAACTACGGTTCCGTTTCTTCTAGCTCAGCTAGTGCATTGCTTCAATTGGGAGCTTCCACCGGGCGTGTCTACTGATGACATGGACATGACTGAGGAATTTGGCCTTACAACGCCAAGAACTCAGAATTTGCTAGCGATTCCAACTTATCGCTTAATAAAGAAGGTTAATTGA 1596 0.4129 MHQAMQSHPKPCLQLFPIEASKLIMLPQALAIPALLLLILLFILSVALLLNPKEHKNGRKYPPGPKPLPIIGNLHQLGKLPHRSMHELSKKYGPVMSLKLGKVPTIVISSPETAELVLKTHDIVFASRPITQASKYICYDSKGIIFTEYNSYWRNMMKLCMFELLNMPKVQSFAPLRREEVGLFVESLKKSAASREVVNVSEKIGDVVENTVHRMIWGKFDDKFGVKQLARDVLLLMGVLDLGDYIPWVGAFDLQGLVRRFKKAHKKFDEVLEIIIKDHEASARLTDQKSVQSIDFVDILLSHMHQSKDKHAITKTNIKAILLDIIIGAVDTTIMSVDWNMAELIRHPRVMKKLQDELKNVVGMGRMVEEADLPKLPYLDMVMKETFRLHPPAPLLPPRECTEDITINGYFIAKKSRVLVNSWTLGRDPKMWSDNFEDFYPERFHNTDIDSHGHNYQFLPFGSGRRRCPGMLLGLTTVPFLLAQLVHCFNWELPPGVSTDDMDMTEEFGLTTPRTQNLLAIPTYRLIKKVN* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4355 531 Gene3D Cytochrome P450 49 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4355 531 Pfam Cytochrome P450 62 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4355 531 PANTHER CYTOCHROME P450 93A3-LIKE 36 527 - -
Lja3g4355 531 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4355 531 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4355 531 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4355 531 SUPERFAMILY Cytochrome P450 62 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4355 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Lja3g4355 531 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4355 531 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4355 531 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4355 531 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4355 531 PRINTS E-class P450 group I signature 113 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4355 531 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4355 531 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4355 531 PANTHER CYTOCHROME P450 FAMILY PROTEIN 36 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4355 Lja-Chr3 84016653 84019814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4355 60 527 Cytochrome P450 AT5G57260 41.079 7.69e-128 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4355 - - lja:Lj3g3v0755410.1 639.417