Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4332 ATGATGACTATACTTGTGTTCATGATTATGTTTGCTTACACACTCGTGCCCTCTGCAGCAATTGATTCAATCAGTGTGTCCCAGTCTTTAAGTGATGGCAAGACCTTAGTGTCCAAAAGTGGAGAGTTTGAACTTGGTTTCTTCAGCCCAGGCCAGTCAAAGAAACGTTACCTGGGGATTTGGTACAATGAAAATAACAGTAACGGTTTTGTTTGGGTTGCAAACAGGGACAGTCCCATAAACAACACCTCAGGCATCTTAACAGTGATAAACACAGGCAACCTTGTGCTGAGTCAAAATGATTCTGTTGTATGGTCCACAACCTCAGCAAAATACGCACAGAATCCGCTAGCCGAGCTCCTGGACAGTGGCAATCTTGTGATAAGGAATGAGGGAGCAACAAACCCAGAAGCGTATTTGTGGCAAAGCTTTGACTATCCAACGGACTCGATTTTGCCAGGGATGAAGTTGGGATGGGACCTCCGGGCTGGTTTCGAAAGGAGAATAACTTCTTGGAAGAGTCCTGAAGATCCATCCGCAGGAGACACTTCTATGGGTCTGGTGCTGAACAATTATCCAGAATTTTATCTGATGAAAGGAGCAGCAAAGTCCTACCGAATTGGACCATGGAATGGCCTTCATTTCAGTGGCTTATCAGATCGGAAAACAAACCAAATATATGACCTCAAGTTTGTTGTCAGTAATAATTTAAGGTACGCCTCCAATAAGGATGAGATGTTCTACACCTTAACCATGAAGAATAGTTCTATCTTAGTGCGTGCACACATAGAACAATCCAGTTTTTCTATCATTATATGGTCCGAACAGAGACAAAGTTGGATGACTTATGAAATCAGGCCGAGGGACCAATGTGATGTTTATGGGATCTGTGGACCCTTCGCCTTCTGTCAAATTGAAACAGTACCAATGTGCCGATGTTTAACAGGGTTCATTCCGAAGTCACCACAAGCATGGAACTCATCTGACTGGAGCGACGGATGTGTCCGTAATAAATCGTTAAGCTGCTGGACTGATGAAGGCCGCGTGGAGGATATTTTTGTCAAACATATAGGCATGAAGGTGCCAGCTACTACAAACACTTTGCTTAATGAGAATATTGGTTTAAATGAGTGCAGACTGAATTGCTTGAGCAATTGCTCTTGTACAGCTTACTCTAGTTCAGACATAACAGGAGGAGGTAGGGGCTGTGTCATGTGGTTTGGCGATCTAATTGACATGACACAGTTTGATGATGGTGGGCAAGATCTTTATATCAGGCTTTCCGGTTCACTGTCAGAGCCTGGGCACAACACAAGGATACCGATAATAATTTCTACCACCGTTGCTGCAGCAGTTTCAGGGATGCTTTTAGTTTGTATTTTTGCCATATACAGAGTTCGAAGGAAAGTTGCCGAGAATTCAAAGACAAAAGAAAACATCGAAAGATATCTAGACGATCTAGATCTGCCGCTGTTTGATCTGTTAACAATCACAACTGCTACAAACAACTTCTCCTTGAATAATAAGATTGGACAAGGTGGTTTTGGACTTGTATATAAGGGGAAATTAGCAGATGGGCAAGAAATCGCTGTTAAGAGACTTTCCAGTAGCTCAGGTCAAGGAATTACTGAGTTCTTAACAGAAGTGAAACTAATTGCAAAGCTACAACACCGAAATCTTGTAAAGCTTCTCGGCTGTTGTATTGGAGGAAATGAAAAATTACTAGTATATGAATTCTTGGTTAATGGTAGCCTTGACTCCTTTATTTTTGATCAAATCAAAGGTGAACTGTTGGAGTGGCCCCGACGCTTGCAGATAATATTTGGAATTGCTAGAGGGCTTATGTATCTTCATCAAGATTCCCGGTTAAGGATCATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGATAACTTAAATCCGAAAATATCAGATTTTGGAATGGCGAGATCTTTTGGAGGAGATCAGACTGAAGGAAACACAAATAGAGTAGTTGGGACTTATGGATACATGGCACCCGAGTATGCTAGTGATGGGTTATTTTCAATAAAATCTGACGTTTTCAGCTTTGGCATTTTGTTGTTGGAGATTATAAGTGGGAACAAAAATAGAGCTCTCTGCCATGGAAACCAGACTCTTAATCTAGTTGGATATGCATGGACACTTTGGAAAGAGGGAAAGACTTCACTGTTGATTGACTCAAGAATAAAGGACTCATATGTTGTTTCAGAACTTTTGCGATGCTTCCATGTTAGTCTCTTATGCGTACAGCAATACCCGGAGGATAGGCCTACCATGACCTCAGTAGTTCTAATGTTGAGTAGTGAGATGGAATTGGTTGAGCCTAAAGAGCCTGGTTTCTTTCCAAGGGCAGTTTCTGATGATGGAAATGTATGCTCAAATCCAAGCAATATGAGTTCAAATGATGAATTAACCATTACATCATTAAATGGCAGGTGA 2466 0.4136 MMTILVFMIMFAYTLVPSAAIDSISVSQSLSDGKTLVSKSGEFELGFFSPGQSKKRYLGIWYNENNSNGFVWVANRDSPINNTSGILTVINTGNLVLSQNDSVVWSTTSAKYAQNPLAELLDSGNLVIRNEGATNPEAYLWQSFDYPTDSILPGMKLGWDLRAGFERRITSWKSPEDPSAGDTSMGLVLNNYPEFYLMKGAAKSYRIGPWNGLHFSGLSDRKTNQIYDLKFVVSNNLRYASNKDEMFYTLTMKNSSILVRAHIEQSSFSIIIWSEQRQSWMTYEIRPRDQCDVYGICGPFAFCQIETVPMCRCLTGFIPKSPQAWNSSDWSDGCVRNKSLSCWTDEGRVEDIFVKHIGMKVPATTNTLLNENIGLNECRLNCLSNCSCTAYSSSDITGGGRGCVMWFGDLIDMTQFDDGGQDLYIRLSGSLSEPGHNTRIPIIISTTVAAAVSGMLLVCIFAIYRVRRKVAENSKTKENIERYLDDLDLPLFDLLTITTATNNFSLNNKIGQGGFGLVYKGKLADGQEIAVKRLSSSSGQGITEFLTEVKLIAKLQHRNLVKLLGCCIGGNEKLLVYEFLVNGSLDSFIFDQIKGELLEWPRRLQIIFGIARGLMYLHQDSRLRIIHRDLKASNVLLDDNLNPKISDFGMARSFGGDQTEGNTNRVVGTYGYMAPEYASDGLFSIKSDVFSFGILLLEIISGNKNRALCHGNQTLNLVGYAWTLWKEGKTSLLIDSRIKDSYVVSELLRCFHVSLLCVQQYPEDRPTMTSVVLMLSSEMELVEPKEPGFFPRAVSDDGNVCSNPSNMSSNDELTITSLNGR* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4332 821 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 31 820 - -
Lja3g4332 821 Gene3D - 17 144 IPR036426 -
Lja3g4332 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Lja3g4332 821 ProSiteProfiles Bulb-type lectin domain profile. 21 141 IPR001480 -
Lja3g4332 821 ProSiteProfiles PAN/Apple domain profile. 342 428 IPR003609 -
Lja3g4332 821 CDD STKc_IRAK 510 775 - -
Lja3g4332 821 CDD B_lectin 27 147 IPR001480 -
Lja3g4332 821 SMART ntp_6 348 427 IPR003609 -
Lja3g4332 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 178 IPR036426 -
Lja3g4332 821 CDD PAN_AP_plant 340 428 - -
Lja3g4332 821 MobiDBLite consensus disorder prediction 800 821 - -
Lja3g4332 821 Pfam S-locus glycoprotein domain 205 321 IPR000858 GO:0048544
Lja3g4332 821 Gene3D Phosphorylase Kinase; domain 1 464 579 - -
Lja3g4332 821 SUPERFAMILY Protein kinase-like (PK-like) 483 775 IPR011009 -
Lja3g4332 821 Pfam D-mannose binding lectin 70 173 IPR001480 -
Lja3g4332 821 SMART serkin_6 504 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4332 821 Pfam Protein tyrosine and serine/threonine kinase 505 772 IPR001245 GO:0004672|GO:0006468
Lja3g4332 821 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 820 - -
Lja3g4332 821 Pfam PAN-like domain 349 413 IPR003609 -
Lja3g4332 821 SMART blect_4 27 147 IPR001480 -
Lja3g4332 821 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Lja3g4332 821 ProSiteProfiles Protein kinase domain profile. 504 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4332 821 Gene3D Transferase(Phosphotransferase) domain 1 580 786 - -
Lja3g4332 821 PIRSF SRK 1 821 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4332 Lja-Chr3 83455675 83459294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4332 442 793 Receptor kinase-like Gene Family AT4G23190 51.821 1.45e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g4332 PK_Tyr_Ser-Thr 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4332 - - gmx:100812007 1155.2