Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4331 ATGGACATTATCATCACATTCATAATCACACTTACCTACATACTCCTCCTTCTCCCTTACAAACTTTCCATAGCAGCTGACTCCATTCATTTGTCACAATCCATCACCGATGGCCAAACCTTGGTATCCCAAGATGGAACCTTTGAACTCGGTTTCTTCCGCCCCGATGCTAACTCTAACAGAACATACCTCGGTATCTGGTTCAAGAACATCCCTGTCCGGCAAGTAGTTTGGGTCGCAAACAGGGTCAATCCAATCACCGCCTCTGATAGCATCATGTTAACAATGAATAGCACAGGCAACCTCGTCCTCACTCAAAACAGCACCGCCATTTGGTTCACAAACATTCAACAACAAGCACTGAATAACAATCCAGTGGCTGTGCTATTGGACAGTGGCAATCTTGTGGTGAGAAATGACCGAGAAGGGTACTTGTGGCAGAGCTTTGACTATCCATCAGACACAATGTTGCCAGGGATGAAAATTGGAAGAAGCTTCAAACTGGGACAAGATTGGAAATTGACATCATGGAAGAGTCCACAAGATCCATCACCAGGTGAATTTTCATGGGGTTTAGTACTCCATGATTATCCAGAGTATTACATGATGAAGGGAAGAGACTCAAGAGAGGTTAAATTGTCCCGTTATGGACCATGGAATGGGAAACATCTTAGTGGGTTACCTGAGCTACGATACATAACATGGGTGAATTATGAGTTTGTCACCAACAAAGATGAAATCTTCTACAGGTATAGCCTCAACAAAACCAACTCGGTCATCTCAATCATAGTGTTGAACCAAACTACTCTGTTTCGCTATGTGTGGATTGAACAAGATCGAAATTGGAGGACATATCGGTCGTTTCCTAAGGACTTTTGTGATACTTATGGACTTTGTGGAGCCTATGGGAATTGTGTGATAACCAAAGGACAAGTGTGTCAATGTTTCAAGGGGTTTAGTCCAAAGTCGCCACAAGCATGGACAATATCAGACTGGAGTGAAGGATGTGTCCGAGATGAACCATTGAGATGCAATAGTGGGATGAACAAAGTTGGGTTTGTCAAATTTGAAGGGCTAAAAGTTCCGGATACAAAACATGCTTGGTTGAATGGAAATATGGGTCTTGAGGAATGCAGAGAGAAGTGCTTGAATAATTGCTCTTGTATGGCTTATGCAAATTCAAACATAAGTGGTGGAGGTAGTGGATGTGTCTTGTGGTTTGGCGATCTAATTGACATAAGACAGTTTGATGATGGTGGCCAAGATCTTTATATTCGGATGTCTGCTTCAATGTTAGAGGAAGGGACTGAACAGGGGAATGAAGGAAGGATTATAATTGCTATCATCATCGCTTCAATTTGTGGATTGTTTTTACCGTCTACTTGTTTTGCTTGGAGAGTTTGGAGGAAGATTGCTGAAAGATCTCATATGGCTGATATAGATCTCCCACTGTTTGATCTAGCAACAATTGTCATAGCCACAAATGGCTTCTCGATGAACAAAAAGATTGGAGAAGGTGGTTTTGGACCTGTATATTGGGGAAAATTAGCAACTGGTCAAGAAATTGCCGTGAAGAAACTTTCAAGCTTATCGGGACAAGGAATAACTGAGTTCATCAACGAAGTAAAACTAATTGCACAACTCCAACACAGAAATCTTGTGAACCTTCTAGGATGCTGCATTCACGGAAATGAACGAATGTTGATTTATGAATACATGGACAATGGCAGCTTACACTCGTTCATTTTTGTTGAATTTCAACGTTTAATACCATATTTTGTTTGCAAAACAGATGATACAAAGAGTAAATTGCTAAAGTGGCATCAACGGTTCCACATAATATGTGGAATCGCTAGAGGGCTTTTGTATCTTCATCAAGATTCTAGATTGAGGATTATCCATAGAGATCTGAAAGCTAGTAATGTTTTACTTGATCAAGATTTGAATCCAAAAATATCAGATTTTGGAACAGCCAAAACTTTTGGAGGTGACCAGACTGAAGGAAACACAAAAAGAATAATTGGAACTTATGGGTACATGGCTCCAGAATATGCTGCTAAAGGAATGTTTTCAATGAAATCTGATGTTTTCAGCTTTGGTGTTCTATTATTAGAGATTATATGTGGAAAAAGAAATAGAGCATATTATCATACAGATGACACTCTTAACCTTGCTGGTGAAGCTTGGACTTTGTGGAAAATGGGTAAAGCATTAGAGTTGATTGACTCAAATATAGTCGAATCATATGTTGAGTCTCAAGTATTGCGTTGCATGCATGTTGGCCTTCTGTGCATGCAACAAAATCCAAATGATAGACCTATCATGGCCTCTGTGATCTTGATGCTAGCGAGTGAGGTGGAATTGGAGGACCCGAAAGCGCCTGGTTTCTTTTATAGTAATATTTCAAATCAATCATCCTTACGCCAGAGTCGAAAGGATAGAAGTTCAGCATATGAAGTAACTATTTCTTCATTTGATCCTCGATGA 2487 0.4013 MDIIITFIITLTYILLLLPYKLSIAADSIHLSQSITDGQTLVSQDGTFELGFFRPDANSNRTYLGIWFKNIPVRQVVWVANRVNPITASDSIMLTMNSTGNLVLTQNSTAIWFTNIQQQALNNNPVAVLLDSGNLVVRNDREGYLWQSFDYPSDTMLPGMKIGRSFKLGQDWKLTSWKSPQDPSPGEFSWGLVLHDYPEYYMMKGRDSREVKLSRYGPWNGKHLSGLPELRYITWVNYEFVTNKDEIFYRYSLNKTNSVISIIVLNQTTLFRYVWIEQDRNWRTYRSFPKDFCDTYGLCGAYGNCVITKGQVCQCFKGFSPKSPQAWTISDWSEGCVRDEPLRCNSGMNKVGFVKFEGLKVPDTKHAWLNGNMGLEECREKCLNNCSCMAYANSNISGGGSGCVLWFGDLIDIRQFDDGGQDLYIRMSASMLEEGTEQGNEGRIIIAIIIASICGLFLPSTCFAWRVWRKIAERSHMADIDLPLFDLATIVIATNGFSMNKKIGEGGFGPVYWGKLATGQEIAVKKLSSLSGQGITEFINEVKLIAQLQHRNLVNLLGCCIHGNERMLIYEYMDNGSLHSFIFVEFQRLIPYFVCKTDDTKSKLLKWHQRFHIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDQDLNPKISDFGTAKTFGGDQTEGNTKRIIGTYGYMAPEYAAKGMFSMKSDVFSFGVLLLEIICGKRNRAYYHTDDTLNLAGEAWTLWKMGKALELIDSNIVESYVESQVLRCMHVGLLCMQQNPNDRPIMASVILMLASEVELEDPKAPGFFYSNISNQSSLRQSRKDRSSAYEVTISSFDPR* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4331 828 Pfam Protein tyrosine and serine/threonine kinase 498 779 IPR001245 GO:0004672|GO:0006468
Lja3g4331 828 SMART blect_4 32 152 IPR001480 -
Lja3g4331 828 SMART serkin_6 497 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4331 828 SMART ntp_6 348 427 IPR003609 -
Lja3g4331 828 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 14 825 - -
Lja3g4331 828 CDD PAN_AP_plant 341 426 - -
Lja3g4331 828 Pfam S-locus glycoprotein domain 215 323 IPR000858 GO:0048544
Lja3g4331 828 Gene3D Phosphorylase Kinase; domain 1 461 572 - -
Lja3g4331 828 ProSiteProfiles PAN/Apple domain profile. 344 428 IPR003609 -
Lja3g4331 828 PANTHER - 14 825 - -
Lja3g4331 828 Gene3D Transferase(Phosphotransferase) domain 1 573 793 - -
Lja3g4331 828 Gene3D - 21 149 IPR036426 -
Lja3g4331 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Lja3g4331 828 PIRSF SRK 1 828 IPR024171 GO:0004674
Lja3g4331 828 SUPERFAMILY Protein kinase-like (PK-like) 480 782 IPR011009 -
Lja3g4331 828 ProSiteProfiles Bulb-type lectin domain profile. 26 150 IPR001480 -
Lja3g4331 828 Pfam PAN-like domain 350 413 IPR003609 -
Lja3g4331 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 183 IPR036426 -
Lja3g4331 828 ProSiteProfiles Protein kinase domain profile. 497 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4331 828 Pfam D-mannose binding lectin 76 178 IPR001480 -
Lja3g4331 828 CDD B_lectin 32 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4331 Lja-Chr3 83440855 83448835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4331 456 828 Receptor kinase-like Gene Family AT4G23150 49.091 1.07e-116 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g4331 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4331 - - lja:Lj0g3v0171409.1 1091.26