Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4329 ATGGCTCGCGAATTACGATTTTTCAAGGAACAAATGTTGAAGGCAGGTGTTTCACCAAAACTGTCTGCAACACAGGTTGTTGTGAACATTGATAACCTTGAGGTAAAACTTTTAGAGATCGAGTTAGAGTTAACTGAGATGAATGCAAATGGTGAAAAATTGCAATGA 168 0.375 MARELRFFKEQMLKAGVSPKLSATQVVVNIDNLEVKLLEIELELTEMNANGEKLQ* 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4329 55 PANTHER VACUOLAR PROTON ATPASES 1 55 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lja3g4329 55 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1 55 - -
Lja3g4329 55 Coils Coil 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4329 Lja-Chr3 83428111 83428363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4329 1 55 Primary Pumps ATPases(2) AT4G39080 51.786 1.63e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4329 K02154 - gmx:100783125 79.3369