Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4328 ATGGACATTCTTATCACATTCATAATTACACTTACCTACATACTCCTCCTTCTCCCTTACAAACTTTCCATAGCAGCTGACTCCATTCATTTGTCACAACCCCTCACCAATGGCAAAACCTTGGTGTCCAAAGATGGAACCTTTGAACTCGGTTTCTTCCGCCCGGACGGTAACTCTATCAAAACATACCTCGGCATCTGGTTCAAGAACATCCCTGTTCGGAAAGTCGTTTGGGTTGCAAACAGAGCCAACCCAGTCAACGGTTCAAAGGACATCATGTTAACTGTGAACATGACAGGCAACCTCGTCCTCACACAAGATGACACTGTCGTGTGGTTCACAAACATTCAGGAACAAGCACTGAATAACAATTCAGTGGCTGTGCTATTGGATAGTGGCAATCTTGTGGTGGGGAATGACCGACAAGGGTACTTGTGGCAGAGCTTTGACTATCCGTCCGACACATTGCTGCCAGGGATGAAATTGGGAAGAAGCTTCAAATTGGGACATGATTGGAAAATAACATCATGGAAGAGTCCACAAGATCCATCCCCTAGTGAATTTTCATGGGGTTTACTACACCATGATAATTATCCTGAATATTACATCATGAAGGGAACAAATATAAAATTGTCCCGTTTTGGACCATTCAATGGCCAAAGTCCTAGTGGAGTGCCAGAAATAAGATACCTTACAACTTCTACTGATCCTCTCCAAAATCGCTATGAGTTTGTCACCAACAAAGATGAGAATTTCTACAGGTATAGCTACAACACAACCAACCCGGTCATCTCAATTATAGTGTTGAACCAAGCCACTGTAATTCGCTATGTGTGGGTTGAACAAGATCAAATTTGGAGGACATATCGGTCATTTCCTAAAGACAAGTGTGACACTTATGGTCTTTGTGGAGCCTATGGGAAATGCATAATTAAAAGAGGACAAATGTGCCAATGTATCAAGGGGTTCACTCCAAAGTCACCACAAGCATGGACATTAACCGATTGGAGTGGAGGGTGTGTCCGAGATAAACCATTAAGCTGCAACAATGGGACGCAAAAAGATGGGTTTATCAAATTTGGTGGCCTTAAAGTTCCGGATACATCACATGCATCGTTGAATGAGACCATGGGTCTTGAGGAATGCAGAGACAAGTGCTTGAATAATTGCTCTTGTATGGCTTACACAAATTCAAACATAAATGGTGGAGGTCGTGGTTGTGTCATGTGGTTTGGCGATCTAATTGACATAAGACAGTTTGATGATGGAGGCCAAGATCTTTATATTCGGATGCCTACCTCAATGTTAGGGACTGAACACAGCAGGCGTGAACGAATGATTACAATTTATATCACCATTGCTTCAATTTGTGGATTGCTTCTACCTTGTCTTTATTTTGTTTGGAGAGTCCGCAGGAAGATTGTTGAAAGAGCTCAAAGACATATGGCTGATATAGATCTCCCATTGTTTGATCTAACAACAATTGCTGCAGCCACTAATGGCTTCTCGATGAACAAAAAGATTGGAGAAGGTGGTTTTGGACCAGTATATTTGGGAAAATTAACAAATGGTCAAGAAATAGCCGTGAAAAAACTTTCAAGCTTATCCAGTCAAGGAATGATTGAGTTCATAACTGAAGTGAAACTAATTGCACAACTTCAACACCGGAATCTTGTAAGGCTTCTAGGTTGTTGCATTGAAGGACAAGAACGAATTTTGATTTACGAATACATGGGAAATGGTTGCCTACACTCTTTCATTTTTGGTAATATTAAGGGTAAATTGCTAAAGTGGCCTCAACGGCTCAACATAATTTGTGGAATATGTAGAGGGCTTGTGTATCTTCACCAAGATTCCAGATTGCGGATTATCCACAGAGATCTCAAAGCTAGTAATATTTTACTTGATCAAGATTTAAATCCCAAAATATCAGATTTTGGAATAGCCAAAACTTTTGGAGGAGATCAAACTGAAGGAAACACAAAGAGAATAATTGGGACTTATGGGTACATGGCTCCGGAGTATGTTGCAAAAGGGATTTATTCAGCAAAATCCAATGTTTTCAGTTTTGGTGTTCTATTGTTAGAGATCATATGTGGCATAAGAAATAAAGCATACTATCACACAGATGACAATCTTAACCTTGTTGGTCAAGCTTGGACATTGTGGAAAGAGGGTAGAGCATCAGAGTTAATTGACTCAAACATTGAAAACTCATATGTTGTTTCGGAAGTATTGCGTTTTATGCATGTTGGTCTCTTGTGCGTACAACAAAACCCAAACGATAGGCCTACCATGACCTCTGTGATGCTAATGCTAGAGAGTGAGATGGAACTAAAGGAGCCTAAAGAACCTGGTTTCTTTTATAGTAATATTTCATCACCTGATTCATGTCTACGTAGGAGTCGAAGGGATAGAAGTTTAGCATATGACGTAACATTTTCTTCATTTGGTCCTCGATGA 2463 0.4036 MDILITFIITLTYILLLLPYKLSIAADSIHLSQPLTNGKTLVSKDGTFELGFFRPDGNSIKTYLGIWFKNIPVRKVVWVANRANPVNGSKDIMLTVNMTGNLVLTQDDTVVWFTNIQEQALNNNSVAVLLDSGNLVVGNDRQGYLWQSFDYPSDTLLPGMKLGRSFKLGHDWKITSWKSPQDPSPSEFSWGLLHHDNYPEYYIMKGTNIKLSRFGPFNGQSPSGVPEIRYLTTSTDPLQNRYEFVTNKDENFYRYSYNTTNPVISIIVLNQATVIRYVWVEQDQIWRTYRSFPKDKCDTYGLCGAYGKCIIKRGQMCQCIKGFTPKSPQAWTLTDWSGGCVRDKPLSCNNGTQKDGFIKFGGLKVPDTSHASLNETMGLEECRDKCLNNCSCMAYTNSNINGGGRGCVMWFGDLIDIRQFDDGGQDLYIRMPTSMLGTEHSRRERMITIYITIASICGLLLPCLYFVWRVRRKIVERAQRHMADIDLPLFDLTTIAAATNGFSMNKKIGEGGFGPVYLGKLTNGQEIAVKKLSSLSSQGMIEFITEVKLIAQLQHRNLVRLLGCCIEGQERILIYEYMGNGCLHSFIFGNIKGKLLKWPQRLNIICGICRGLVYLHQDSRLRIIHRDLKASNILLDQDLNPKISDFGIAKTFGGDQTEGNTKRIIGTYGYMAPEYVAKGIYSAKSNVFSFGVLLLEIICGIRNKAYYHTDDNLNLVGQAWTLWKEGRASELIDSNIENSYVVSEVLRFMHVGLLCVQQNPNDRPTMTSVMLMLESEMELKEPKEPGFFYSNISSPDSCLRRSRRDRSLAYDVTFSSFGPR* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4328 820 Pfam PAN-like domain 351 417 IPR003609 -
Lja3g4328 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 183 IPR036426 -
Lja3g4328 820 CDD PAN_AP_plant 345 432 - -
Lja3g4328 820 PIRSF SRK 1 820 IPR024171 GO:0004674
Lja3g4328 820 SMART blect_4 32 152 IPR001480 -
Lja3g4328 820 Gene3D Transferase(Phosphotransferase) domain 1 578 785 - -
Lja3g4328 820 Pfam S-locus glycoprotein domain 213 327 IPR000858 GO:0048544
Lja3g4328 820 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 796 - -
Lja3g4328 820 SUPERFAMILY Protein kinase-like (PK-like) 487 799 IPR011009 -
Lja3g4328 820 ProSiteProfiles Protein kinase domain profile. 502 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4328 820 SMART serkin_6 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4328 820 SMART ntp_6 352 431 IPR003609 -
Lja3g4328 820 ProSiteProfiles Bulb-type lectin domain profile. 26 150 IPR001480 -
Lja3g4328 820 Gene3D Phosphorylase Kinase; domain 1 466 577 - -
Lja3g4328 820 PANTHER - 25 796 - -
Lja3g4328 820 CDD STKc_IRAK 508 774 - -
Lja3g4328 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Lja3g4328 820 Gene3D - 21 149 IPR036426 -
Lja3g4328 820 Pfam D-mannose binding lectin 76 178 IPR001480 -
Lja3g4328 820 ProSiteProfiles PAN/Apple domain profile. 348 432 IPR003609 -
Lja3g4328 820 Pfam Protein tyrosine and serine/threonine kinase 503 770 IPR001245 GO:0004672|GO:0006468
Lja3g4328 820 CDD B_lectin 32 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4328 Lja-Chr3 83411615 83422071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4328 490 788 Receptor kinase-like Gene Family AT4G23150 57.333 1.41e-112 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g4328 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4328 - - gmx:100802962 959.903