Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4327 ATGGAAATTCTAATGAGATTCATAATCACACTGACCTACATACTCCTTCTTCTCCCTTACAAACTTTCCATAGCAGCTGACTCCATTCATTTATCACAATCCATCACCGATGGCCAAACCTTGGTGTCCCAAGATGAAACCTTCGAACTCGGTTTCTTCCGTCCCGACGGCAACTCAAACAGAACATACCTCGGTATCTGGTTCAAGAACATCCCTGTTCGACAAGTCGTTTGGGTCGCAAACAGGGTCAAACCAATCACAGGCTCTGATAACATCATGTTAACAGTGAACAGCACAGGCAACCTCGTCCTCACACAAAACAGCACGGTTGTATGGTTCACAAACATTCAAAAACAAGCACATACCAATCCGGTGGCGGTGCTATTGGACAACGGCAATCTCGTGGTGAGAAATGAGGGAGAAACAAACCAAGAAGAGCATTTGTGGCAGAGTTTTGACTATCCATCCGACACATGGTTGCCAGACATGAAATTGGGAAGAAGCTTTAAATCCGGTCATGATAGGAAATTAACATCATGGAAGAGTCCTGAAGATCCATCCCCTAGTGATTTTACTTGGGGTTTAGCACTCCGTGATTATCCAGATTCTTATATTATGAAGGGAACAAAGATTAAATTGTCCCGTTTTGGACCATGGAATGGCGAATATCCTAGTGGAGCTCCAGAAGTAAGATACACTACTTCATCATCTACTCATCTTCTGGGCAATCGGCATGAGTTTGTCGTCAACAAAGATGAGATGTTCTACAGGTATACCCAAAACAAAAGCTCAGTCATCTCAATAATAGTATTGAAACAAAGCACTCTGTTACCCTATTATGTGTGGATTGAACAAGAGCAAATTTGGAAGACATATAGGTCATTTCCTAGAGACTATTGTGATACATATGGCCTTTGTGGAGCCTATGGGAATTGCGTAATTAGCAGAGGAGATATGTGCCAATGTTTCAAGGGGTTCAGTCCAAAGTCACAAGCAATAACCGATTGGAGTGAAGGATGTGTCAGAGATGAACCATTGAGCTGCTATAATGGGACGCAAAAAGATGGGTTTATCAAATTTGGAGGGTTAAGAGTTCCTGATACAACACATGCTTTGTTAAATGAATCTATCAGTCTTGAGGAATGCAGAGACAAGTGCTTGAATAATTGCTCTTGTATGGCCTACACAAATTCAAACATAAGTGGTGGAGGTAGTGGTTGTGTCATGTGGTTTGGCGATCTAATTGACATAAGACAGTTTGATAATGGTGGCCAAGATCTTTACATTCGGATGCCTGCTTCAATGTTAGGGACTGACCACGGGAGTGAAAGAAGGATTATAATTCATATCACTATTGCTTCAATTTGTGGCTTGCTCGTTCCATGTCTTTATTTTGTCTGGAGATTTCGCAGGAAGATTGTTGCAGAAACATCTCAACTGGCTGAGATAGATCTCCCATTGTTTGATCTAACAACAATTGCTGCGGCAACTAATGGCTTCTCGATGAACAAAAAGATTGGAGAAGGTGGTTTTGGACCAGTATATTGGGGAAAATTAACAAATGGTCAAGAAATAGCTGTGAAGAAACTTTCAAGCTTATCGAGCCAAGGAATGACTGAGTTCATAAATGAAGTGAAACTAATTGCACAACTTCAACATCGAAATCTAGTAAAGCTTCTTGGTTGTTGCATTCAGGGACAAGAACGAGTGTTGATTTACGAATACATGAACAATGGTAGCCTACACTCTTTCATTTTTGATGATATTAAGGGTAAACTGCTAAAGTGGCCTCAACGACTCCACATAATTTGTGGAGTATGTAGAGGACTTCTGTATCTTCACCGAGATTCAAGATTGAGAATTATCCACAGGGATCTCAAAGCTAGTAATGTTTTACTTGATCAAGATTTAAATCCAAAAATATCAGATTTTGGAACAGCTAGAACTTTTGGAGGAGACCAGACAGAAGGAAACACAAAGAGAATAATTGGGACCTATGGGTACATGGCTCCGGAATATGTTTCTAAAGGGATTTTTTCAGTGAAATCTGATGTTTTCAGTTTTGGTGTTCTATTGTTAGAGATCATATGTGGCAAAAGAAATAAAGCATATTATCATACAGATGACAATCTTAACCTAGTTGGTCAGGCTTGGACATTGTGGAAAGAAGGTATAGCATCAGAGTTAATTGACTCAAACATAGGAGACTCATATGTAGTTTCAGAAGTATTGCGTTGCATGCATGTTAGTCTCTTGTGCGTACAACAGAACCCAAATGATAGGCCTACCATGACCTCTGCGATGCTAATGCTAGAGAGTGAGATGGAACTAGAGGAGCCTAAAGAACCTGGTTTCTTTTATAGTAATATTTCACTTGATTCATATTTACGTAGTAGTCGGAAGGATAGAAGTTTAGCATATGATGTAACAATTTCTTCATTTGGTCCTCGATGA 2454 0.4002 MEILMRFIITLTYILLLLPYKLSIAADSIHLSQSITDGQTLVSQDETFELGFFRPDGNSNRTYLGIWFKNIPVRQVVWVANRVKPITGSDNIMLTVNSTGNLVLTQNSTVVWFTNIQKQAHTNPVAVLLDNGNLVVRNEGETNQEEHLWQSFDYPSDTWLPDMKLGRSFKSGHDRKLTSWKSPEDPSPSDFTWGLALRDYPDSYIMKGTKIKLSRFGPWNGEYPSGAPEVRYTTSSSTHLLGNRHEFVVNKDEMFYRYTQNKSSVISIIVLKQSTLLPYYVWIEQEQIWKTYRSFPRDYCDTYGLCGAYGNCVISRGDMCQCFKGFSPKSQAITDWSEGCVRDEPLSCYNGTQKDGFIKFGGLRVPDTTHALLNESISLEECRDKCLNNCSCMAYTNSNISGGGSGCVMWFGDLIDIRQFDNGGQDLYIRMPASMLGTDHGSERRIIIHITIASICGLLVPCLYFVWRFRRKIVAETSQLAEIDLPLFDLTTIAAATNGFSMNKKIGEGGFGPVYWGKLTNGQEIAVKKLSSLSSQGMTEFINEVKLIAQLQHRNLVKLLGCCIQGQERVLIYEYMNNGSLHSFIFDDIKGKLLKWPQRLHIICGVCRGLLYLHRDSRLRIIHRDLKASNVLLDQDLNPKISDFGTARTFGGDQTEGNTKRIIGTYGYMAPEYVSKGIFSVKSDVFSFGVLLLEIICGKRNKAYYHTDDNLNLVGQAWTLWKEGIASELIDSNIGDSYVVSEVLRCMHVSLLCVQQNPNDRPTMTSAMLMLESEMELEEPKEPGFFYSNISLDSYLRSSRKDRSLAYDVTISSFGPR* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4327 817 Pfam D-mannose binding lectin 76 181 IPR001480 -
Lja3g4327 817 Gene3D - 21 152 IPR036426 -
Lja3g4327 817 Gene3D Transferase(Phosphotransferase) domain 1 576 783 - -
Lja3g4327 817 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 813 - -
Lja3g4327 817 Pfam PAN-like domain 351 417 IPR003609 -
Lja3g4327 817 ProSiteProfiles Protein kinase domain profile. 500 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4327 817 CDD PAN_AP_plant 345 432 - -
Lja3g4327 817 CDD B_lectin 32 155 IPR001480 -
Lja3g4327 817 CDD STKc_IRAK 506 765 - -
Lja3g4327 817 SMART serkin_6 500 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4327 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 186 IPR036426 -
Lja3g4327 817 Gene3D Phosphorylase Kinase; domain 1 465 575 - -
Lja3g4327 817 Pfam S-locus glycoprotein domain 215 330 IPR000858 GO:0048544
Lja3g4327 817 SMART blect_4 32 155 IPR001480 -
Lja3g4327 817 Pfam Protein tyrosine and serine/threonine kinase 501 766 IPR001245 GO:0004672|GO:0006468
Lja3g4327 817 ProSiteProfiles PAN/Apple domain profile. 348 432 IPR003609 -
Lja3g4327 817 SMART ntp_6 352 431 IPR003609 -
Lja3g4327 817 PANTHER - 25 813 - -
Lja3g4327 817 SUPERFAMILY Protein kinase-like (PK-like) 485 790 IPR011009 -
Lja3g4327 817 ProSiteProfiles Bulb-type lectin domain profile. 26 149 IPR001480 -
Lja3g4327 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Lja3g4327 817 PIRSF SRK 1 817 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4327 Lja-Chr3 83400598 83407755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4327 465 817 Receptor kinase-like Gene Family AT4G23150 52.198 1.28e-119 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g4327 PK_Tyr_Ser-Thr 3.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4327 - - gmx:100802962 983.786