Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4324 ATGGAAATTCTTACTTTCATCTTTATACTTCTTGCCTCTCTCAAAGTTTGCATAGGATCAGACACCATTCATTTGTCACAATCCATCACCTATAACAAAACCTTGGTGTCCCAAAATGGATGGTTTGAACTTGGTTTCTTCAATCCCGACATGTCTAATAAAACATACCTCGGTATCTGGTTCAAGAACATCCCTATTCGACAAGTCGTTTGGGTCGCAAATAGGGTCCAACCAATCATCGGCTCTGATGGCATCATGTTAACATTGAACAGCACAGGCAACCTCGTCCTCACCCAAAACGGCACTGTTTTTTGGCACACAAACATTCAAAAGCAAGAACTGAATGATAATCTAGTGGTTGTTCTATTGGACAGTGGCAATCTTGTGGTGAGAAATGACCAAGAAGGGTATTTGTGGCAGAGCTTTGACTACCCATCAGACACATTGCTGCCAGGGATGAAATTGGGAAGAAGCTTCAAATTGGGACATGATTGGAAATTGACATCATGGAAGAGTTCACAAGATCCATCACCAGGTGATGTTACATGGAGTTTAGTATTGCATAATTATCCTGAATATTACATGATGAAGGGAACAGAGAAACACTACAGGTTAGGACCATGGAATGGACAACATATTAGTGGAATACCAGAACAAGAATCTAACTCCTTCATGAATTACGACCTTGTCAGTGATGAAAATGAAATGTTCTACTCGTTCAGCCTCAAGAACAAATCTGTCATCTCAATTATGCTGCTGAATCAAAGTCAAACAACTGTTTTTCACAATGTGTGGAATGATGAGAATCAAAATTGGAGGACTTATATTTCACTCCCTAAGGACTATTGTGACACTTATGGTCTATGTGGAGCTTATGGGAATTGCATGATTACAAGGGGACAAGTGTGCCAATGTTTCAAGGGGTTTAGTCCGAAGTCACCACAAGCATGGACAACATCGGATTGGAATGAAGGATGTGTGAGAGATACACCATTGAGCTGCAACAATGGGACAGTGAAAGATGGATTTGTTAAATTTGAAGGGCTGAAAGTTCCGGACACTACACATACTTGGTTGAATAGAACTATGGGTCTTGAGAAATGCAGAGAGAAGTGCTTGAATAATTGTTCTTGTATGGCTTATGCAAATTCAAACATAAGTGGTGGAGGTAGTGGATGTGTCTTGTGGTTTGGTGATCTGATTGACATAAGGCAGTTTGATAATGGTGGCCAAGATCTTTACATTCGGATGTCAGGTTCAATGTTAGAAGGGCGTGAAGACAGGCGCAAAAAGAAGAGGAGGACTATAGTTGCTACCACGATTATTGCTTTAATTTGTGGAGTGTGTATTTATTTCATCTGGAGAGTTCGGAGGAAGAATGCTGAGAGATCTCAAGGTCATGTGGATGATCTGGATCTCCCATTGTTTGATCTACGAACAATTTCTAAAGCCACTAATGGCTTTGCAATGAACAAAAAGATTGGAGAAGGTGGTTTTGGACCTGTATATAAGGGAAAATTAGCAGATGGTCAAGAAATTGCAGTGAAGAAACTTTCAATCTTCTCAGGACAAGGGATGGATGAGTTCATAAATGAAGTAAAATTAATTGCACAACTTCAACATCGAAACCTTGTAAAACTTTTGGGTTGCTGCGTTCAAGGAGAACAACGAATGTTAGTTTATGAATACATGGCTAATGGTAGCCTAGACTCCTTCATTTTTGATGCTACCAAGGGTAAAATGCTACAATGGCCTCTACGGTTCAACATAATATGTGGAATTGCTAGGGGGCTCATGTATCTTCACCAAGATTCTAGACTGAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGATAATTTGAATCCAAAAATATCAGATTTTGGAACAGCTAGAACTTTTGGAGGAGACCAAATTGAAGGAAACACAAAAAGAATAATAGGAACTTATGGGTACATGGCACCTGAATATGCTGTTGATGGAATCTTTTCAGTGAAATCTGATGTTTTTAGCTTTGGCATTTTATTGTTGGAGATTTTATGCGGCAAAAGAAATAGGGGATATTACCACATAGATGACACTCTTAATCTTGTTGGTCAAGCATGGAGATTGTGGAAAGAAGGCAGGGCTTTAGAGTTGATGGACTCAAACATAGGTAGTGACACATGTGTTGTATCAGAAGTGATGCGTTGCTTACATGTTAGTCTACTGTGCGTGCAACAAAATCCAAATGATAGGCCTATTATGGCCTCTGTGATTCTAATGTTAGGGAGTGAAATGGAGTTGGAGGAGCCTAAAGAACCTGGATTCATTTTGAAAAACTTTCAAACTGAGTCATGTGTACATACAAGTCAGAATGGAGAATGTAGTTCAACAAATGAAGTGACAATGACCTTATTATATGCTCGATGA 2424 0.3923 MEILTFIFILLASLKVCIGSDTIHLSQSITYNKTLVSQNGWFELGFFNPDMSNKTYLGIWFKNIPIRQVVWVANRVQPIIGSDGIMLTLNSTGNLVLTQNGTVFWHTNIQKQELNDNLVVVLLDSGNLVVRNDQEGYLWQSFDYPSDTLLPGMKLGRSFKLGHDWKLTSWKSSQDPSPGDVTWSLVLHNYPEYYMMKGTEKHYRLGPWNGQHISGIPEQESNSFMNYDLVSDENEMFYSFSLKNKSVISIMLLNQSQTTVFHNVWNDENQNWRTYISLPKDYCDTYGLCGAYGNCMITRGQVCQCFKGFSPKSPQAWTTSDWNEGCVRDTPLSCNNGTVKDGFVKFEGLKVPDTTHTWLNRTMGLEKCREKCLNNCSCMAYANSNISGGGSGCVLWFGDLIDIRQFDNGGQDLYIRMSGSMLEGREDRRKKKRRTIVATTIIALICGVCIYFIWRVRRKNAERSQGHVDDLDLPLFDLRTISKATNGFAMNKKIGEGGFGPVYKGKLADGQEIAVKKLSIFSGQGMDEFINEVKLIAQLQHRNLVKLLGCCVQGEQRMLVYEYMANGSLDSFIFDATKGKMLQWPLRFNIICGIARGLMYLHQDSRLRIIHRDLKASNVLLDDNLNPKISDFGTARTFGGDQIEGNTKRIIGTYGYMAPEYAVDGIFSVKSDVFSFGILLLEILCGKRNRGYYHIDDTLNLVGQAWRLWKEGRALELMDSNIGSDTCVVSEVMRCLHVSLLCVQQNPNDRPIMASVILMLGSEMELEEPKEPGFILKNFQTESCVHTSQNGECSSTNEVTMTLLYAR* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4324 807 SUPERFAMILY Protein kinase-like (PK-like) 471 760 IPR011009 -
Lja3g4324 807 SMART ntp_6 338 417 IPR003609 -
Lja3g4324 807 Pfam S-locus glycoprotein domain 203 313 IPR000858 GO:0048544
Lja3g4324 807 CDD PAN_AP_plant 330 416 - -
Lja3g4324 807 SMART blect_4 26 145 IPR001480 -
Lja3g4324 807 ProSiteProfiles Protein kinase domain profile. 488 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4324 807 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 22 804 - -
Lja3g4324 807 Pfam D-mannose binding lectin 69 171 IPR001480 -
Lja3g4324 807 ProSiteProfiles Bulb-type lectin domain profile. 20 143 IPR001480 -
Lja3g4324 807 PANTHER - 22 804 - -
Lja3g4324 807 Gene3D - 16 142 IPR036426 -
Lja3g4324 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Lja3g4324 807 PIRSF SRK 1 807 IPR024171 GO:0004674
Lja3g4324 807 CDD B_lectin 26 145 IPR001480 -
Lja3g4324 807 Pfam Protein tyrosine and serine/threonine kinase 490 756 IPR001245 GO:0004672|GO:0006468
Lja3g4324 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 176 IPR036426 -
Lja3g4324 807 CDD STKc_IRAK 494 760 - -
Lja3g4324 807 SMART serkin_6 488 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4324 807 ProSiteProfiles PAN/Apple domain profile. 334 418 IPR003609 -
Lja3g4324 807 Pfam PAN-like domain 338 403 IPR003609 -
Lja3g4324 807 Gene3D Transferase(Phosphotransferase) domain 1 564 773 - -
Lja3g4324 807 Gene3D Phosphorylase Kinase; domain 1 451 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4324 Lja-Chr3 83365903 83369498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4324 435 778 Receptor kinase-like Gene Family AT4G23230 54.000 2.52e-121 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g4324 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4324 - - gmx:100802962 1042.72