Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4319 ATGGCAGGCCGATTTCTAAGCATTTTTCTTTTGATGATACCTATGTTGCTTCTTAGCTCATCTCAAGCAGCAGCAAGGGAATTTCATGTTGGTGGCAAAGATGGGTGGGTGCTGAAACCTTCTGAAGATTACAATCATTGGGCTCAAAGAAACAGATTTCAAGTGAATGATACTCTATCGATTGATTGGGTTCTAGTTGTGAGCAAGGAGGACTATGATTCATGCAACACAAGAAACCCCATAAAAAAGATGGATGATGGGAATTCATCTTTTAACCTCGACAAATCAGGTCTTTATTTCTTCATCAGTGGAAACACCGACCACTGCAAAAATGGTCAAAAGCTCATAGTCCTAGTTATGTTCATGAAGCACACTACTCATGCACCACCATCTAAGGCACCAGAAATTCACTCGTCCGGTTTGAATGCTCCAGCATTGTCACCGTCTGAGACTTCAAGTGTGGCGAGGTTTGGCGGTTCAGTGGGCATGGGTTTGGGTGTGTGGATCGGAGTTGGAGTTGTTTTGAGTGTCATCAACTATATATGA 546 0.4286 MAGRFLSIFLLMIPMLLLSSSQAAAREFHVGGKDGWVLKPSEDYNHWAQRNRFQVNDTLSIDWVLVVSKEDYDSCNTRNPIKKMDDGNSSFNLDKSGLYFFISGNTDHCKNGQKLIVLVMFMKHTTHAPPSKAPEIHSSGLNAPALSPSETSSVARFGGSVGMGLGVWIGVGVVLSVINYI* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4319 181 Pfam Plastocyanin-like domain 36 113 IPR003245 GO:0009055
Lja3g4319 181 ProSiteProfiles Phytocyanin domain profile. 26 121 IPR003245 GO:0009055
Lja3g4319 181 PANTHER BLUE COPPER PROTEIN 10 137 IPR039391 GO:0009055
Lja3g4319 181 CDD OsENODL1_like 26 120 IPR041846 -
Lja3g4319 181 SUPERFAMILY Cupredoxins 25 120 IPR008972 -
Lja3g4319 181 Gene3D - 24 123 IPR008972 -
Lja3g4319 181 PANTHER EARLY NODULIN-LIKE PROTEIN 2 10 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4319 Lja-Chr3 83227774 83228888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4319 4 178 Phytocyanin Superfamily AT4G28365 42.105 5.80e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4319 - - lja:Lj6g3v1316280.1 256.529