Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4315 ATGGCAATATTCACTCTTCCATTTGTTCTTACCAAACTACTTATACTGTTCTTTCCACTCTCATATGCAGCTGACACCATTAGTAGCTCACAATCACTCCCTGATGGCAGTACCTTGGTCTCAAAAGATGGAACCTTTGAAATTGGTTTCTTCAGTCCAGGTAACAACAACACAAACCGCTACCTAGGAATATGGTACAAAAAGATTCCAGTTACAACTGTTGTTTGGGTTGCCAACCGTGAAAACCCAGTGACAGATAATTCTAGCAGGTTAAGCATAAACACACAGGGAAAGCTTGTGATTCTAAGGAACAACAAGACTCTTGTTTGGTCAGCAAACTCAACAACAACAACACAAGCAGTGAGTCCAATTGTGCAACTTCTAGACTCAGGAAACTTGGTAGTAAGAGATGAGAAAGACCAAAATGAACAAAACTACTTGTGGCAGAGCTTTGATTATCCTTGTGATACTTTTCTAGCAGGAATGAAGATTGGATGGAACCTGAAAACTGGTTTGAATCGTTATCTATCTGCATGGAAGAATTGGGATGATCCTTCTCCAGGGGATTTGACGTGGGGTCTAGTACTTGGAAACACTCCTGAATTGGTTATGTGGAAGGGGTCTACAGAGTACTATAGGAGTGGACCTTGGAATGGTGTTAGATTCAGTGGCAAAACCACACCCATTTTCGACTTAGAATTTGTGACTTCTGATGATGAAATATTCTACACTTACAACCCCAAGAATATCTCAGTGATCACAAGAGTTGTTCTGAACCAATCTGTTTATTCGCGCCAGCGCTATAATTGGAATGAAGAAAACAAGGTTTGGAAGCTTTACTCAGCAGTGCCAAGAGATAACTGTGACAACTATAATGTTTGTGGACCATTTGGGAATTGTATTGTGAGTGAGTCGCCACCGTGCCAATGTCTAACAGGGTTCAGGCCTAAATCACGGCAGAATTATGAGGCACTGGACTGGACACAAGGATGTGTACTGAGTGAACCTTGGAGCTGCAGGATAAAAAATCAAGATGGCTTTAAGAAATTTAGTGGGCTGAAAATGCCAAATACTACAAGGACTTGGGTTAGTGGAAATTTTACACTTGAGAATTGCAGGGCTAAATGCTTTGAAAACTGTTCTTGCACAGGCTATGCAAACATTGATATCAGGGGAGAAGGTAATGGTTGTATCAATTGGTTTGGAGATCTAATTGATTTAAGGGTTGCTTCAGTTCCAGGGCAAGATTTATATGTTCGAATGGCTGCTTCTGATGAAAAGGGAGGGCATAAAACAGTATTGGCTGTGGCAATTTCAATTAGCCTTCTATTGGTCTTTGTGATTGTTTTCACTATTACTTACATTTACTGGAGGAAAAGAAAGATTAGAGGAGAGACCTCAGAAGAGAAAGAAGGTGGCCAGGAAGAAGACATGGAGCTTCCTTTCTTTGATTTTGCTACCATAGCTCATGCAACTAATGACTTCTCAAGTGACAAGAGGCTTGGTCAAGGTGGTTTTGGACCTGTGTACAGGGGTACACTAGCAGATGGACAGGAGATTGCTGCGAAAAGGCTTTCAAATAGTTCAGGACAAGGAATTCAGGAGTTCAAGAATGAAGTTATATTGTGTGCCAAACTTCAGCACCGGAATCTTGTTAAGGTTCTAGGCTGTTCTACTCAAGGAGAGGAAAAAGTGCTTATTTATGAATACATGCCTAATAAAAGCCTAGATTTCATACTGTTTGATCCTTATCGAAGTAAACTCTTAAATTGGTCTAAGCGATTCAACATTATATTTGGAATTGCTCGGGGACTTCTTTATCTTCATCAAGATTCTAGATTGAGAATCATCCATCGCGATCTGAAAGCAAGTAATGTTCTGCTAGATGGTGAGTTGAATCCAAAAATTTCTGATTTTGGAGTGGCAAGAATGTTTAGTGGGAATCAAACAGAAGGGAATACAAAAATGGTTGCTGGAACATACGGCTACATGGCACCAGAATATGCACTTGAAGGACTATTCTCCATCAAATCTGATGTGTTTAGCTTTGGCGTATTATTGCTAGAGATAATAAGTGGGAAGAAAAACACCAGAGTTTTCTTTCCAAATCATGGATTTAATCTTTTAGGACATGCATGGAGATTGTGGAAAGAGGAAACTCCAATGAAACTCATTGATGCTTCTTTGGGTGAGTCATTTACCTTATCAGAAGCACTACGCTGCATCCATGCTGGTCTTCTATGTGTGCAACTGCATCCAGAGGATAGGCCAAACATGGCAACAGTGATTTTGATGTTGAGCAGTGAAAATGCTTTGCCACAGCCTAAGGAGCCTGGTTTCCTTATTGAGAGAATGTCTGCTGCTGGAGAAACTTCGTCTAGCAATAACATCAATTCTTCCACTAATGAAATAACTGTGTCACTGTTAGAACCTAGATAG 2439 0.4039 MAIFTLPFVLTKLLILFFPLSYAADTISSSQSLPDGSTLVSKDGTFEIGFFSPGNNNTNRYLGIWYKKIPVTTVVWVANRENPVTDNSSRLSINTQGKLVILRNNKTLVWSANSTTTTQAVSPIVQLLDSGNLVVRDEKDQNEQNYLWQSFDYPCDTFLAGMKIGWNLKTGLNRYLSAWKNWDDPSPGDLTWGLVLGNTPELVMWKGSTEYYRSGPWNGVRFSGKTTPIFDLEFVTSDDEIFYTYNPKNISVITRVVLNQSVYSRQRYNWNEENKVWKLYSAVPRDNCDNYNVCGPFGNCIVSESPPCQCLTGFRPKSRQNYEALDWTQGCVLSEPWSCRIKNQDGFKKFSGLKMPNTTRTWVSGNFTLENCRAKCFENCSCTGYANIDIRGEGNGCINWFGDLIDLRVASVPGQDLYVRMAASDEKGGHKTVLAVAISISLLLVFVIVFTITYIYWRKRKIRGETSEEKEGGQEEDMELPFFDFATIAHATNDFSSDKRLGQGGFGPVYRGTLADGQEIAAKRLSNSSGQGIQEFKNEVILCAKLQHRNLVKVLGCSTQGEEKVLIYEYMPNKSLDFILFDPYRSKLLNWSKRFNIIFGIARGLLYLHQDSRLRIIHRDLKASNVLLDGELNPKISDFGVARMFSGNQTEGNTKMVAGTYGYMAPEYALEGLFSIKSDVFSFGVLLLEIISGKKNTRVFFPNHGFNLLGHAWRLWKEETPMKLIDASLGESFTLSEALRCIHAGLLCVQLHPEDRPNMATVILMLSSENALPQPKEPGFLIERMSAAGETSSSNNINSSTNEITVSLLEPR* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4315 812 CDD STKc_IRAK 501 766 - -
Lja3g4315 812 Gene3D Phosphorylase Kinase; domain 1 469 570 - -
Lja3g4315 812 PANTHER - 23 809 - -
Lja3g4315 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Lja3g4315 812 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Lja3g4315 812 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 809 - -
Lja3g4315 812 SMART ntp_6 342 421 IPR003609 -
Lja3g4315 812 MobiDBLite consensus disorder prediction 791 812 - -
Lja3g4315 812 Pfam Protein tyrosine and serine/threonine kinase 498 725 IPR001245 GO:0004672|GO:0006468
Lja3g4315 812 SUPERFAMILY Protein kinase-like (PK-like) 477 780 IPR011009 -
Lja3g4315 812 SMART blect_4 30 154 IPR001480 -
Lja3g4315 812 SMART serkin_6 495 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4315 812 Pfam Domain of unknown function (DUF3403) 767 812 IPR021820 GO:0004674
Lja3g4315 812 Pfam PAN-like domain 341 407 IPR003609 -
Lja3g4315 812 ProSiteProfiles Protein kinase domain profile. 495 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4315 812 Pfam S-locus glycoprotein domain 212 318 IPR000858 GO:0048544
Lja3g4315 812 Gene3D - 20 151 IPR036426 -
Lja3g4315 812 PIRSF SRK 1 812 IPR024171 GO:0004674
Lja3g4315 812 Gene3D Transferase(Phosphotransferase) domain 1 571 776 - -
Lja3g4315 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 185 IPR036426 -
Lja3g4315 812 CDD B_lectin 30 154 IPR001480 -
Lja3g4315 812 CDD PAN_AP_plant 342 422 - -
Lja3g4315 812 Gene3D Hepatocyte Growth Factor 338 411 - -
Lja3g4315 812 ProSiteProfiles Bulb-type lectin domain profile. 24 148 IPR001480 -
Lja3g4315 812 Pfam D-mannose binding lectin 73 180 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4315 Lja-Chr3 83183577 83187678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4315 459 812 Receptor kinase-like Gene Family AT4G11530 52.909 1.98e-128 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g4315 PK_Tyr_Ser-Thr 9.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4315 - - gmx:100790436 1058.51