Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4314 ATGTCCATTTTCCCAAGAATTCTGCACTGTATTCTCAATCTACTATTTTTCTTCTCTCAAATTTCCTTAGCAATTGACACCATCACTCAGCTTCAGCCACTTCCTGATGATGGAACCACCTTGGTTTCTAAAAACGGAACCTTTGAGCTGGGATTCTTTAACCCCGGCAATTCCCCGAATCGCTATGTGGGAATCTGGTACAAAAACATCCCAGTTAGAAGAGCGGTTTGGGTCGCGAACCGCGACAATCCAATCAAAGACAACTCTAGCAAGCTGATCATCAACCAAGAAGGAAACCTTGTGCTCCTCAACCAAAACAATTCCCTTCTTTGGTCAACAAACAAAACAACAACAACAAGCACAAACGCTTCGAGTCTTGTCTTTGCATCGCTCTTGGACACTGGAAATTTAGTACTCAATGATAACAACAACACCAACAAAGAAGAAGAAGCGCTATGGCAGAGTTTTGAACACCCCAGCGACACGGTTTTACCGGGAATGAAAATGGGATGGGACAGAAAAACCGGTATCAACAAGCTTTTGACAGCTTGGAGAAACTGGGATGATCCATCTCCAGGGGACTTAACCTCCGGCATTCTCCTCACCGATAATCCCGAGACCGCGATCTGGAAAGGTTCATCTCTCTATTATAGGTCAGGACCGTCCACTGGGGCGCAAACCAGCCAGATAGTTGGCCTGCAAGCGAACCCGGTGTACAATTTCACTTTTTTCCACAACAATGACGAGGTCTACTACATGTTCACCCTCGAGAATAGTTCCGTAGTTTCTATAGTTGTCCTCAACCAGACTCTCTCTTCCCGGCAGCGCTTGACGTGGGTCCCGCAGTCAAACGCGTGGACCCTGTACAACGCGCTGCCGGTAGACAGCTGCGATGTCTACAACGGGTGCGGCGCGAATGGGAATTGCGTGCTAGATAAGTCACCTATTTGTCAGTGTTTGGATGGGTTTGAGCCCAAGTCGCCTGCACAGTGGAATGCGCTGTACTGGGCTAGTGGTTGTGTTCGGAGTCCGGGGTGGGAGTGCAGGGTGAAGGATAAAGATGGGTTTCGGAGATTTCCAGGGATGAAAGTGCCGGATACGAGGTATAGTTTGGTGAATGAGAGCATGACTCTTGAGGAGTGTAGAGGGAAGTGTTTGGAGAATTGTAACTGTACTGCTTACTCGAGCTTGGATCCTAGTGGTGGAGGTAGTGGTTGTTCTATGTGGTTTGGACATCTTCTTGATTTGAGAGTTTCACAAAGTGGGCAGGATCTGTATGTGAGAACGGTGGCTTCAGATTCAGATTCTGGACATGGGCATAGGAAAACAGTAGTCCTGGCGGTTTCAATCCCTGTTTCACTGGTTGTTGTGGCGCTCTTAGCATTCTACATTTATTGGACCAAAATTAAACGCAAAGATAAAACCATGCGCATAAAAGAGAGAGATGAAGATGACCATGAAGATATGGAGCTTCCTTTCTTTGATCTTGCTACCATACTCATTGCCACCAAGAACTTCTCAATTGACAACAAACTTGGTGAAGGTGGTTTTGGACCAGTATACAAGGGTACATTGCAAGACGGACAAGAGATAGCAGTCAAAAGGCTTTCAAAGAGTTCTGGACAAGGATTGTTAGAATTTAAGAATGAAGTTATATTATGTGCAAAACTTCAACATAGAAATCTTGTTAAGGTCCTAGGTTTTTGTGTTGATGGAGATGAGAAAATGCTACTCTATGAGTACATGCCCAACAAAAGCCTAGACTCATTTATTTTTGATCCGGTTCAAAGAAAATTGTTAGATTGGTCTACGCGCTTTAACATATTACATGGGATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCAAGATTAAGGATCATACACAGGGATCTAAAAGCAAGCAATGTATTATTAGACAATGATATGAATCCAAAAATTTCAGACTTTGGCATAGCAAGAATGTGTGGAGAGGATCAAATGGAAGGAAGGACAAGAAGAATAGCAGGGACATACGGTTATATGGCACCTGAATATGCCATTGATGGACTATTCTCTATAAAATCAGATGTATTTAGCTTTGGAGTATTATTGCTGGAAATAGTCAGTGGAAAGAAAAACAAAGGAATTACCTACCAGGATGAAGATTTCAATCTTATTGCACATGCATGGAGACTGTGGAATGAGAACACTCCTCAGAAATTGATTGATGATTATTTGAGAGACTCCTGTAATCTATCAGAAGCTTTACGTTGCATTCAAATTGGTCTTTTATGTTTGCAACATCATCCTCATGATAGGCCAAACATGACATCAGTGGTTGTGATGTTGAGCAGTGAAAATGCTTTACCCCAACCAAAGGACCCTGGTTTCTTAATTAGAAAGATCTCAAATGAAGAAGAAGAATCTTCTAAAGCACATACATCTTCATCGGTGAATAAAGTAACTATCTCTTTAATAAAAGCTAGATAG 2472 0.4276 MSIFPRILHCILNLLFFFSQISLAIDTITQLQPLPDDGTTLVSKNGTFELGFFNPGNSPNRYVGIWYKNIPVRRAVWVANRDNPIKDNSSKLIINQEGNLVLLNQNNSLLWSTNKTTTTSTNASSLVFASLLDTGNLVLNDNNNTNKEEEALWQSFEHPSDTVLPGMKMGWDRKTGINKLLTAWRNWDDPSPGDLTSGILLTDNPETAIWKGSSLYYRSGPSTGAQTSQIVGLQANPVYNFTFFHNNDEVYYMFTLENSSVVSIVVLNQTLSSRQRLTWVPQSNAWTLYNALPVDSCDVYNGCGANGNCVLDKSPICQCLDGFEPKSPAQWNALYWASGCVRSPGWECRVKDKDGFRRFPGMKVPDTRYSLVNESMTLEECRGKCLENCNCTAYSSLDPSGGGSGCSMWFGHLLDLRVSQSGQDLYVRTVASDSDSGHGHRKTVVLAVSIPVSLVVVALLAFYIYWTKIKRKDKTMRIKERDEDDHEDMELPFFDLATILIATKNFSIDNKLGEGGFGPVYKGTLQDGQEIAVKRLSKSSGQGLLEFKNEVILCAKLQHRNLVKVLGFCVDGDEKMLLYEYMPNKSLDSFIFDPVQRKLLDWSTRFNILHGIARGLLYLHQDSRLRIIHRDLKASNVLLDNDMNPKISDFGIARMCGEDQMEGRTRRIAGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLEIVSGKKNKGITYQDEDFNLIAHAWRLWNENTPQKLIDDYLRDSCNLSEALRCIQIGLLCLQHHPHDRPNMTSVVVMLSSENALPQPKDPGFLIRKISNEEEESSKAHTSSSVNKVTISLIKAR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4314 823 Pfam D-mannose binding lectin 76 185 IPR001480 -
Lja3g4314 823 CDD B_lectin 37 159 IPR001480 -
Lja3g4314 823 Pfam Protein tyrosine and serine/threonine kinase 507 776 IPR001245 GO:0004672|GO:0006468
Lja3g4314 823 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 34 816 - -
Lja3g4314 823 SMART blect_4 32 159 IPR001480 -
Lja3g4314 823 Gene3D Hepatocyte Growth Factor 347 428 - -
Lja3g4314 823 SUPERFAMILY Protein kinase-like (PK-like) 488 795 IPR011009 -
Lja3g4314 823 ProSiteProfiles Bulb-type lectin domain profile. 25 152 IPR001480 -
Lja3g4314 823 ProSiteProfiles EGF-like domain profile. 293 329 IPR000742 -
Lja3g4314 823 CDD STKc_IRAK 512 777 - -
Lja3g4314 823 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Lja3g4314 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Lja3g4314 823 Gene3D Transferase(Phosphotransferase) domain 1 582 787 - -
Lja3g4314 823 ProSiteProfiles PAN/Apple domain profile. 348 430 IPR003609 -
Lja3g4314 823 Gene3D Phosphorylase Kinase; domain 1 467 581 - -
Lja3g4314 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 190 IPR036426 -
Lja3g4314 823 Pfam PAN-like domain 348 416 IPR003609 -
Lja3g4314 823 ProSiteProfiles Protein kinase domain profile. 506 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4314 823 SMART ntp_6 351 429 IPR003609 -
Lja3g4314 823 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 34 816 - -
Lja3g4314 823 CDD PAN_AP_plant 351 429 - -
Lja3g4314 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Lja3g4314 823 SMART serkin_6 506 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4314 823 Pfam Domain of unknown function (DUF3403) 778 823 IPR021820 GO:0004674
Lja3g4314 823 Gene3D - 19 156 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4314 Lja-Chr3 83176664 83181730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4314 445 794 Receptor kinase-like Gene Family AT4G23230 54.958 2.11e-130 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g4314 PK_Tyr_Ser-Thr 6.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4314 - - gmx:100776310 1107.05