Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4313 ATGTCCATTCTCCATGGTATGCTTCTTATTTCCAACCTACTATTGTTGTTCTCTCAATTCACGTTTGCAACAGACACCATTACCAACCTTGACTCACTTCCTGATGATGGAACCACCTTGGTTTCAAACGATGGAACCTTTGAGCTGGGTTTCTTCAATCCAGGCAGCTCCTCAAACCGCTATGTAGGAATCTGGTACAAGAACATCCAAGTTAGAACAGTTGTTTGGGTTGCCAACCGTGACAATCCAATCAAAGACAACTCCAGCAAGTTGATCATAAGCCAAGATGGAAACCTTGTACTTCTCAACAAAAACAACTCAATTCTCTGGTCAACAAACACAACTGCGAAGGCGGCGAGTCCCGTTGCGCAGCTCTTAGACACTGGAAATTTAATAGTCAGAGATGAGAAAGACAACAACAGCAACAATGAAGAAAGTTTCTTATGGCAGAGCTTTGATCATCCTTGTGATACACTGTTACCAGGTATGAAGATTGGATGGGACAGAAAATCTGGAATTAACAGGCTTTTCACTGCTTGGAAAAATTGGGATGATCCATCTTCAGGGAACTTAACAGCAGCCACGGTGCTTACCAGGAATCCTGAATGGGTAATTTGGAAGGACTCTGTTGAGTTTTTCAGGTCTGGACCATGGTCCAGTGCGGTACTTGAATTCACAAATAACCCAATTTATGATTTCCAATTTGTGAACAATGAAGATGAAGTGTACTACACGTTCACTCTCAAGAATAGCTCTGTGATTTCTATAAATGTTTTGAACCAAACCCTTTCTCTCCGTCAACGCCTCATTTGGATTCCAGAATCAAAAACATGGTCTATTTATCGAATCTTGCCACAAGACAGTTGTGATATTTACAATGTTTGCGGTCCAAATGGAAATTGCATGCTTGATAAATCACCAAGGTGTCAGTGTTTAAATGGATTCGAGCCGAGATCGCCGCAACAATGGAATGCATTGTATTGGACAGAAGGGTGTGGGAGAAGTGAGAAGTGGAGTTGTGGGGTAAAAAACAGAGATGGGTTTAGTAGATTTGGTAGCATGAAGTTGCCTGATACTACAAATTCTTGGATTGATGAGAATATGACTCTTGAAGATTGCAAGGCCAAATGCTTGCAAAATTGTTCATGTTCTGCTTATGCAAACTTGAATCCAAGTGGTGGGGGTAGTGGTTGTTCTATCTGGTTTGGTGATCTTCTTGATTTGAGAGTTTCACAGAGTGGCCAAGATCTATATGTTAGGACAGATGTTTCCAACACAGATTCTATATATCGGCATAGGACAAGTCGGCGAAGGAAAAAGATAGGCTTGGCCATTACAATCCCAGGTTTAGCAATACTTGTGATGGTGTTGGCAATCTACTACATTTGCAAGACTAAAACAGAGAAAAAAGAGAAAGATGAAGGTAGAGATGAAGATTTGGAGCTCCCTTTCTTTGATTTTGCTACAATACTCAATGCCACCAATAACTTCTCAATTGATAACAAGCTCGGTGAAGGTGGTTTTGGGCCAGTATTCAAGGGATTGATAGGTGGACAAGAGATTGCGGTTAAAAGGCTTTCAAGGACTTCCGGGCAAGGGGTGAAAGAGTTTAAGAATGAAGTTATATTATGTTCAAAACTCCAACATCGGAATCTTGTGAAGGTTGTTGGTTGTTGCATTGAAGGAGAGGAGAAAATGCTATTATATGAGTACATGCCAAACAAGAGCCTAGATTCATTTCTTTTCGATTCAGTTCAAAGTAAATTGTTAGATTGGTCCACACGCTTTAATATCTTGCATGGAATTGCTCGAGGGATTCTTTATCTTCATCAAGATTCTAGACTGAGGATCATACATAGAGATTTGAAAGTGAGTAACATTTTGTTGGACAATGATATGAATCCAAAAGTTTCAGATTTTGGCATGGCTAGAATGTGTGGAGGTGATCAAATTGAAGGGAGAACAAACATAATAGTTGGGACATATGGTTACATGGCACCAGAGTATGCCACAGATGGATTGTTCTCTATCAAATCAGATGTGTTTAGCTTTGGCGTATTATTGCTAGAAATTATAAGTGGAAAGAAAAATAGTGCACTTACCTACCAGAGCCAGGATCACAACCTTATTGGGCATGCATGGAGACTTTGGAAAAAGGGCATTCCACATGAATTGATTGATGATTGTTTAAAGGACTCTTGTAAGCTAGAAGAAGTTGTCAGCTGCATTCAAATTGGTCTTTTATGTCTACAACATCATCCTGATGATAGGCCTAACATGGCATCTGTGGTTTTAATGTTGAGCAGTGAAAATGCTTTGCCTCAACCTAAAGAACCTGGTTTCTTATTTAAGAAGGTCTCAAATGAAGGAGAACATTCCCCTGAAAAACAAACATTTTCTTCAATGAATGAAATATCTCTCTCATTATTGAACCCTAGATAG 2442 0.3976 MSILHGMLLISNLLLLFSQFTFATDTITNLDSLPDDGTTLVSNDGTFELGFFNPGSSSNRYVGIWYKNIQVRTVVWVANRDNPIKDNSSKLIISQDGNLVLLNKNNSILWSTNTTAKAASPVAQLLDTGNLIVRDEKDNNSNNEESFLWQSFDHPCDTLLPGMKIGWDRKSGINRLFTAWKNWDDPSSGNLTAATVLTRNPEWVIWKDSVEFFRSGPWSSAVLEFTNNPIYDFQFVNNEDEVYYTFTLKNSSVISINVLNQTLSLRQRLIWIPESKTWSIYRILPQDSCDIYNVCGPNGNCMLDKSPRCQCLNGFEPRSPQQWNALYWTEGCGRSEKWSCGVKNRDGFSRFGSMKLPDTTNSWIDENMTLEDCKAKCLQNCSCSAYANLNPSGGGSGCSIWFGDLLDLRVSQSGQDLYVRTDVSNTDSIYRHRTSRRRKKIGLAITIPGLAILVMVLAIYYICKTKTEKKEKDEGRDEDLELPFFDFATILNATNNFSIDNKLGEGGFGPVFKGLIGGQEIAVKRLSRTSGQGVKEFKNEVILCSKLQHRNLVKVVGCCIEGEEKMLLYEYMPNKSLDSFLFDSVQSKLLDWSTRFNILHGIARGILYLHQDSRLRIIHRDLKVSNILLDNDMNPKVSDFGMARMCGGDQIEGRTNIIVGTYGYMAPEYATDGLFSIKSDVFSFGVLLLEIISGKKNSALTYQSQDHNLIGHAWRLWKKGIPHELIDDCLKDSCKLEEVVSCIQIGLLCLQHHPDDRPNMASVVLMLSSENALPQPKEPGFLFKKVSNEGEHSPEKQTFSSMNEISLSLLNPR* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4313 813 ProSiteProfiles PAN/Apple domain profile. 340 422 IPR003609 -
Lja3g4313 813 CDD PAN_AP_plant 339 421 - -
Lja3g4313 813 Gene3D Transferase(Phosphotransferase) domain 1 572 778 - -
Lja3g4313 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 186 IPR036426 -
Lja3g4313 813 Gene3D - 19 152 IPR036426 -
Lja3g4313 813 Gene3D Hepatocyte Growth Factor 339 421 - -
Lja3g4313 813 Gene3D Phosphorylase Kinase; domain 1 470 571 - -
Lja3g4313 813 Pfam Domain of unknown function (DUF3403) 768 813 IPR021820 GO:0004674
Lja3g4313 813 Pfam Protein tyrosine and serine/threonine kinase 498 765 IPR001245 GO:0004672|GO:0006468
Lja3g4313 813 Pfam PAN-like domain 340 408 IPR003609 -
Lja3g4313 813 MobiDBLite consensus disorder prediction 793 813 - -
Lja3g4313 813 SMART serkin_6 497 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4313 813 SMART ntp_6 343 421 IPR003609 -
Lja3g4313 813 MobiDBLite consensus disorder prediction 786 813 - -
Lja3g4313 813 ProSiteProfiles Protein kinase domain profile. 497 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4313 813 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Lja3g4313 813 SUPERFAMILY Protein kinase-like (PK-like) 480 794 IPR011009 -
Lja3g4313 813 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 33 806 - -
Lja3g4313 813 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Lja3g4313 813 Pfam D-mannose binding lectin 73 181 IPR001480 -
Lja3g4313 813 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 33 806 - -
Lja3g4313 813 CDD STKc_IRAK 503 767 - -
Lja3g4313 813 CDD B_lectin 36 155 IPR001480 -
Lja3g4313 813 SMART blect_4 31 155 IPR001480 -
Lja3g4313 813 Pfam S-locus glycoprotein domain 213 318 IPR000858 GO:0048544
Lja3g4313 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Lja3g4313 813 PIRSF SRK 1 813 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4313 Lja-Chr3 83153464 83156884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4313 444 813 Receptor kinase-like Gene Family AT4G23220 50.000 1.92e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g4313 PK_Tyr_Ser-Thr 5.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4313 - - gmx:100776310 1157.9