Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4309 ATGGTACATAACATCATCTTAGTGTCAGTTTTTTGGTTCTTACTACTGTTAAGAACTTCAATTTCACTAGAAACTTTAGCAGTGAACCAATCTATTAGAGATGGTGAGAGCTTAGTTTCAGCAAGTGGAAGCCTTGAAGCTGGTTTCTTCAGCCCTGGGAACACAACAACGCGTCGATACTTTGGTGTATGGTACAGGAACATAACCCCTCTAACAGTGATATGGGTGGCCAACAGAGAAAAACCACTACAGAACAATCATTCAGGAGTTTTGAAACTGAATGAAAGAGGGATTCTTCAGCTTTTCAATGGCACAAGCAATGCTATTTGGTCATCAAATACATCAAGCAAAGCAGGGAACATTTCAAATCCAATCGCTCAGCTCTTGGATTCAGCAAATTTGGTGGTAAAGGAAACCGAAAAGGCGAGTTTTTTGTGGCAGAGTTTTGATTATCCATGTGATACTTTGTTGTCAGGAATGAAGCTTGGATGGAACTTAGAAACTGGTTTACAAAGATTTTTATCATCATGGAAAAGTTCTGATGACCCTGCTGAGGGAGATTACACTATTAATCTTGATCTTAGAGGGTATCCTCAAATATTAAAATTCAAGGGGTCTGATATAAAAGTTAGATCAGGGCCATGGAATGGTGAATCTATTTCTGGATACCAAGGTCCAACTACAGGAACTTTACAAACATTTGTGTTCAGTGAAAAAGAAGTCTCTTATGGATACGAGCGCGATGCTGATGATGTATCGGTTATCAGCATCTACACTCTAACTCCTTCGGGCGCGGGGCAGACGCTGTTTTGGACGAACCAATCAAATAGCTGGCAAGTTTACTCGACTGGGGAGCTCGATGAATGCGAAAACTATGCATATTGTGGTGCTAATTCTGTGTGCAGCATTGATGGTAACCTTCCAACTTGTGAATGCTTGAAGGGGTTTGTTCCCAAGGTTCCTGAACAATGGAATATATCGTATTGGCTGAACGGCTGTGTTCCGAGGAATGAATCGAGTTGCGAAAACCGACACACTGATGGGTTTTTGAACTACACTCACATGAAATTGCCAGACACTTCTTCATCATGGTTTAATAAGACCATGAGCCTTGAGGAATGTCAGATGAAGTGTCTGAGAAACTGTACCTGTGTTGCCTATGCAAATTTAGATATCAGCAATGGGGGAAGTGGATGTCTGCTTTGGTTTAATAATCTGGTTGATGTGAGGAAATTCTCTCAAAGGGGACAGGATCTTCATGTCAGAGTCCCTGCTTCAGAACTAGATCAAGCTGCAGAAGATGGCCAAGGAAACAACAAAAAGAAGATAGTAGCAGGAGTCACAGTTGTTGTGGCATTTTTTGTGTTAATCACATGTGTATCCATATTCATAATTAAAAATCCAGGGGATGTAAGAAATTTTTACAGAAAGATTCATAAAAACAAGCCAAGCAAGGAAGATGGTGATCTGCCTACATTCGATTTTTCTGTCTTAGCTCACGCCACCGAACACTTTTCATACAGAAACAAGCTTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGCACATTGGTAGATGGACAAGAGGTTGCTGTGAAAAGGCTTTCAAAAAAATCAGGACAAGGGTTGGAAGAATTCAAAAATGAAGTGTCATTGATTGCAAAACTTCAGCACCGTAATCTCGCGAAGCTTCTTGGTTGTTGCGTTCAAGGAGAAGAAAAAATGTTGATCTATGAATACATGCCAAACAGAAGCTTGGACTGCTTTGTTTTTGATGAAAACAAAAAGATCTCATTGGATTGGTGCAAGCGTTTCAATATTATTGGAGGCATTGCTCGAGGGCTTCTTTATCTTCACCAAGACTCTAGGTTGAGGATCATTCATAGAGATCTAAAAACTAGCAATATATTACTAGATGCAAATTTGGATCCTAAGATATCAGACTTTGGCTTGGCTCGAATATTTTTGGGAGATCAAGTTGAGGCAAACACAAGCAGGGTGGCTGGAACATATGGCTACATGCCTCCAGAGTATGCGGCGCGCGGACATTTCTCAGCGAAAACAGATGTCTTTAGTTATGGTGTGATAGTACTAGAGATTATAAGTGGGAAGAAGAACAGGGATTTTTCAGACCCAAAACACTACCATAATCTTCTTGGATATGCATGGAGATTATGGACTGAAGAGAGGCCTTTTGAACTATTGGATGAAGTATTAGGGGAAAAATTCACACCCTTTGAAGTCAAAAGATGCATACAGGTAGGCCTATTATGTGTGCAACACAGACCAGAAGATAGACCAGACATGTCATCAGTTGTTCTTATGCTAAATGGGGAGAAATTATTGCCAGAGCCAAAGCTTCCTGGATATTACAATGAAAATGATGTTAAAGCTGAATCAGATTCTTCATCAGCAAATCGTAAACTGTGCTCAACTAATGAAATATCCATCACAGAGTTAGATGCAAGATAA 2472 0.4025 MVHNIILVSVFWFLLLLRTSISLETLAVNQSIRDGESLVSASGSLEAGFFSPGNTTTRRYFGVWYRNITPLTVIWVANREKPLQNNHSGVLKLNERGILQLFNGTSNAIWSSNTSSKAGNISNPIAQLLDSANLVVKETEKASFLWQSFDYPCDTLLSGMKLGWNLETGLQRFLSSWKSSDDPAEGDYTINLDLRGYPQILKFKGSDIKVRSGPWNGESISGYQGPTTGTLQTFVFSEKEVSYGYERDADDVSVISIYTLTPSGAGQTLFWTNQSNSWQVYSTGELDECENYAYCGANSVCSIDGNLPTCECLKGFVPKVPEQWNISYWLNGCVPRNESSCENRHTDGFLNYTHMKLPDTSSSWFNKTMSLEECQMKCLRNCTCVAYANLDISNGGSGCLLWFNNLVDVRKFSQRGQDLHVRVPASELDQAAEDGQGNNKKKIVAGVTVVVAFFVLITCVSIFIIKNPGDVRNFYRKIHKNKPSKEDGDLPTFDFSVLAHATEHFSYRNKLGEGGFGPVYKGTLVDGQEVAVKRLSKKSGQGLEEFKNEVSLIAKLQHRNLAKLLGCCVQGEEKMLIYEYMPNRSLDCFVFDENKKISLDWCKRFNIIGGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLDPKISDFGLARIFLGDQVEANTSRVAGTYGYMPPEYAARGHFSAKTDVFSYGVIVLEIISGKKNRDFSDPKHYHNLLGYAWRLWTEERPFELLDEVLGEKFTPFEVKRCIQVGLLCVQHRPEDRPDMSSVVLMLNGEKLLPEPKLPGYYNENDVKAESDSSSANRKLCSTNEISITELDAR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4309 823 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Lja3g4309 823 CDD B_lectin 29 152 IPR001480 -
Lja3g4309 823 Gene3D Phosphorylase Kinase; domain 1 478 580 - -
Lja3g4309 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Lja3g4309 823 Pfam D-mannose binding lectin 72 178 IPR001480 -
Lja3g4309 823 CDD STKc_IRAK 511 778 - -
Lja3g4309 823 Pfam Protein tyrosine and serine/threonine kinase 507 774 IPR001245 GO:0004672|GO:0006468
Lja3g4309 823 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 820 - -
Lja3g4309 823 Gene3D Hepatocyte Growth Factor 341 421 - -
Lja3g4309 823 Gene3D - 20 149 IPR036426 -
Lja3g4309 823 CDD PAN_AP_plant 339 424 - -
Lja3g4309 823 ProSiteProfiles Protein kinase domain profile. 505 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4309 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Lja3g4309 823 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 18 820 - -
Lja3g4309 823 SMART serkin_6 505 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4309 823 SUPERFAMILY Protein kinase-like (PK-like) 488 788 IPR011009 -
Lja3g4309 823 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Lja3g4309 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Lja3g4309 823 SMART blect_4 29 152 IPR001480 -
Lja3g4309 823 ProSiteProfiles Bulb-type lectin domain profile. 23 149 IPR001480 -
Lja3g4309 823 Pfam PAN-like domain 341 409 IPR003609 -
Lja3g4309 823 Gene3D Transferase(Phosphotransferase) domain 1 581 783 - -
Lja3g4309 823 ProSiteProfiles EGF-like domain profile. 285 322 IPR000742 -
Lja3g4309 823 SMART ntp_6 344 423 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4309 Lja-Chr3 83075678 83079527 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4309 438 791 Receptor kinase-like Gene Family AT4G23190 53.168 1.47e-127 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lja3g4309 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4309 - - gmx:100776576 1144.03