Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4293 ATGGGTTCGCTCGACGCCCCGATCAGTGCGGAAAACGGCACCGCTCCTCCCACCGGCGCCGGAAAATCTCTTACAGCGGATGTCGGCGCACGCGTCCCGTCGTCAGAGGCGGCGGTGCCGGAGTTGGACACCTCGAAACGACGAAGATCGTCTGTGCTCCCCCTGGAGGTTGGCACGCGCGTCATGTGCCGTTGGAGGGACTCGAAGTACCACCCTGTCAAAGTCATCGAACGCCGAAGAGTCCCTGGCTGTGGCCCCAACGATTACGAGTATTACGTCCATTATACTGAGTTCAATAGGAGGCTTGATGAGTGGGTGAAGCTTGATCAGCTTGATCTTGATTCCGTGGAGGCAGTTGTTGATGAGAAAGTGGAGGAGAAGGGTGCAACAGGTTTGAAGATGACACGCCACCAAAAGAGGAAGATTGACGAAACACATGTAGAGGGCCATGAGGAGCTTGATGCTGCTAGTTTGCGTGAACATGAAGAATTTACTAAAGTGAAAAATATAGCTACTATTGAACTTGGAAGATATGAGATTGAGACATGGTATTTCTCCCCATTCCCACCAGAATACAATGACTGTTTGAGGCTGTACTTCTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTTCAGAGGCATATGAAAAAGTGTGATCTTAAGCATCCCCCTGGTGATGAGATATACAGAAGCGGTACACTGTCAATGTTTGAGGTTGATGGCAAAAAGAACAAGGTCTATGGGCAGAATCTTTGTTATTTGGCCAAGTTATTTCTTGATCACAAGACCCTCTATTATGATGTTGATCTGTTTCTGTTCTATGTTTTATGTGAATGTGACGATCGAGGATGCCACATGGTTGGCTATTTTTCCAAGGAAAAACATTCTGAAGAGTCTTACAATTTGGCATGTATTCTCACCCTTCCACCTTACCAAAGAAAAGGCTATGGCAAATTTCTTATCGCTTTTTCATATGAACTTTCCAAGAAGGAGGGAAAAGTTGGCACACCTGAAAGACCTCTTTCAGACCTTGGACTGCTTAGCTACAGAGGATATTGGACCAGAGTTCTGTTAGACATTCTGAAAAAGCACAAGGGAAACATTTCGATCAAAGAGCTTAGTGATATGACTGCCATTAAAGCTGAAGATATATTGACCACTCTTCAGAGCCTGGAATTGATTCAGTACAGGAAGGGACAGCATGTTATTTGCGCAGATCCAAAAGTTCTGGACCGCCATCTCAAAGCTGCTGGCAGAGGAGGTCTGGATGTTGATGTTAGCAAATTGATCTGGACTCCTTATAAGGAACAAAGTTGA 1326 0.4578 MGSLDAPISAENGTAPPTGAGKSLTADVGARVPSSEAAVPELDTSKRRRSSVLPLEVGTRVMCRWRDSKYHPVKVIERRRVPGCGPNDYEYYVHYTEFNRRLDEWVKLDQLDLDSVEAVVDEKVEEKGATGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLRLYFCEFCLNFMKRKEQLQRHMKKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLDVDVSKLIWTPYKEQS* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4293 441 Pfam MYST family zinc finger domain 167 221 IPR040706 -
Lja3g4293 441 CDD CBD_MOF_like 58 127 - -
Lja3g4293 441 Gene3D - 344 424 IPR036388 -
Lja3g4293 441 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 166 437 IPR016181 -
Lja3g4293 441 Pfam RNA binding activity-knot of a chromodomain 55 113 IPR025995 -
Lja3g4293 441 Gene3D - 224 436 - -
Lja3g4293 441 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 14 441 - -
Lja3g4293 441 Gene3D - 44 165 - -
Lja3g4293 441 PANTHER HISTONE ACETYLTRANSFERASE 14 441 - -
Lja3g4293 441 SMART chromo_7 69 128 IPR000953 -
Lja3g4293 441 Gene3D - 166 222 - -
Lja3g4293 441 SUPERFAMILY Chromo domain-like 49 166 IPR016197 -
Lja3g4293 441 CDD NAT_SF 277 335 - -
Lja3g4293 441 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 165 436 IPR002717 GO:0004402|GO:0006355|GO:0016573
Lja3g4293 441 MobiDBLite consensus disorder prediction 1 49 - -
Lja3g4293 441 Pfam MOZ/SAS family 226 403 IPR002717 GO:0004402|GO:0006355|GO:0016573
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4293 4 441 C2H2 Transcription Factor Family AT5G64610 84.966 0.0 773