Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4286 ATGGGCACTTCTAAGAGGCCACTTCTATTACCATCTCCAAGAACTCCCAATCAACAAGATTTTCCTACCATTCCAGTTTTTTCTGAGCTATCCAAATCAAAGTCAAGTTCCAGCAACACTGTTACTTTCTCTGGGGTGGATACTAGCAACCCAGTTGAGAAGAACTCATCAAATTCATCACCATCCATGTCAATTCACTCTGAGAGGAGCAACTCTGTTAAGGAAGTGAGTTTCTTACCTTCAGGGTCAAAGAGGCTACCTGTTCGTTATGGCTCCTCAAAGGGTGGTGGTGGTGATTCTGGAAGACTCAGCATGTCTCAGAGGGAACTCAGTGATGAAGATGCACGAATTGTTTGTATAGATGACCCTGAGAAGACGAATGAGACGGTTCAATTCGCAGGAAACTCAATCCGCACCGCGAAATACTCCATCCTCACTTTCATCCCAAGGAATCTGTTTGAACAGTTTCATAGAGTTGCTTATGTGTATTTTCTGATAATTGCAATTCTCAATCAGCTTCCTCAGCTTGCAGTGTTTGGGAGGGGTGTTTCAATTTTGCCATTGGCTTTTGTCCTGCTTGTTACAGCTGTGAAGGATGGCTATGAAGATTGGAGGAGGCACCAGTCTGACAAAGTTGAGAATAACAGGTTAGCATCAGTTTTGGTTAATGGTGAATTTGTAGAGAAGAAATGGACTGATATAAGGGTTGGTGAGATCATAAAAATCAATGTAAATGAGGCTATTCCTTGTGATATTGTGTTGCTCTCAACTAGTGATCCAACTGGGGTTGCATATGTGCAGACCCTGAATCTTGATGGAGAGTCCAATTTGAAGACTAGGTATGCAAAACAAGAGACAGGTTCAAAGGTGCCTGGGAAGGACAGCTTGAATGGTTTGATCAAGTGTGAGAAGCCAAACAGGAACATTTATGGGTTTCATGGCAACATGGAAGTTGATGGCAAGAAATTGTCACTAGGATCCTCCAATATTGTTCTTAGAGGGTGTGAGCTCAAGAATACTATTTGGGCAATTGGTGTTGCTGTGTATTGTGGGAGTGAAACCAAAGCAATGCTCAACAGTTCAGGAGCTCCATCAAAGAGGAGCCGGCTCGAGACGCGGATGAATTCTGAAATCATCATGCTCTCTTTCTTTCTTGTAGCACTGTGTACAGTCACCTCAGTTTGTGCTGCTGTTTGGTTAAAGCGCCACAAGGATGAGTTGAATCTCTTGCCTTATTATAGGAAGCTTGATGTTTCAGAAGGGGAAAATGATACCTATAAATACTATGGATGGGGGTTCGAAATCTTGTTCACATTCCTCATGTCAGTTATAGTGTTCCAGGTCATGATTCCTATATCCCTGTACATTTCTATGGAGCTTGTTCGTGTTGGCCAGGCTTACTTCATGATCCGGGACAACCGAATGTATGATGAGGCAACAAATGCTAGATTTCAGTGCAGGGCTTTGAACATTAATGAAGATTTGGGGCAGATTAAATATGTATTCTCAGATAAAACAGGTACACTTACTGAGAATAAGATGGAGTTTCAATGTGCTAGCATCTGGGGGGTTGATTACAGTTCTACGAAAGATGAGGAAGTTGAGAACTCTGTGCAAGTGGATGGAAAGATCTTGAGACCGAAGATGAAGGTGAAAGTTAATCTGGAGCTTTTGCGGTTAGCAAGAAGTGGAGTTGGAAATATGGAAGGAAAAAGGATTCGTGATTTTTTCCTAGCACTGGCAACCTGCAATACTATTGTGCCTATTGTAGTTGACACACCTGATCCTGATGTCAAGCTGATAGATTACCAAGGGGAGTCACCAGATGAACAAGCATTAGCATATGCTGCCGCCGCCTATGGTTTTATGCTTATAGAACGAACCTCAGGCCATATAGTCATCGATATTCATGGAGAAAGACAAAAGTTCAATGTCTTGGGTTTGCATGAATTTGACAGTGATAGGAAGAGAATGTCAGTTATATTGGGGAACCCTGACAATTCTGTGAAACTTTTTGTCAAAGGGGCAGATACAACCATGCTTAGTGTGAGAGATAAATCATCTAACACAGACTTAATCAAAGCCACTGAAAACCATCTTCACTCTTTTTCTTCACTGGGTTTGAGGACACTTGTTATTGGGATGAGGGAACTGAATGCATTAGAATTTGAGGAATGGCATGCTGCATATGAGGCAGCAAGCACTGCTTTGTTTGGCAGGTCCGCGTTGCTTCGAAAGATTTCGAACAATGTAGAGAACAATGTATGCATTTTGGGAGCATCTGCTATTGAAGATAAACTGCAGCAAGGTGTGCCAGAAGCCATTGAGTCTCTAAGGACTGCAGGCATTCATGTGTGGGTGTTGACCGGGGACAAACAAGAAACTGCTATATCCATTGGATACTCCTCAAAGCTTCTAACAAACAACATGACTCAGATCGTAATTAACAGCAACAATAGAGAATCATCTAGAAAGAAGTTACAAGATGCCCTTGCCTTGTCTAAAAAGTTCACCAACACTACTGGAGGAAATTCTGATGCAAATTCAAATCAGATAGCTTTGATTATTGATGGTGGCAGCCTTGTACATATTCTTGACAGTGAATTTGAAGAACAGCTATTTCAACTTGCAAGTAAATGTTCAGTTGTTCTCTGTTGTCGAGTGGCTCCGCTGCAAAAGGCTGGAATTGTGGCTCTTGTGAAGAAAAGGACTTCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTCTCCATGATTCAAATGGCTGATGTTGGAGTTGGAATCAGTGGACAAGAGGGTCGGCAAGCTGTAATGTCATCAGATTTTGCAATGGGCCAGTTTAGATTTTTAGTTCCTCTCTTGTTGGTCCATGGACACTGGAATTACCAACGGCTGGGTTACATGATACTATACAATTTCTACAGAAATGCTGTCCTCGTTTTTGTCCTATTTTGGTATGTGCTCTACACTGCTTTCACTTTGACAACTGCTATAAATGAATGGAGCTCCACATTGTATTCAATAATATACAGTGCACTGCCAACTATCATTGTTGGTATTCTAGACAAGGATCTTGGTAAAAGGACTCTGCTAAAGTATCCTCAGCTCTATGGGGCTGGGCAGAGAGATGAGGCCTACAACAAAAGACTATTCGTGTGGACAATGGCTGATACTTTGTGGCAAAGCATAGTTATCTTCTGGGCTCCCTTGTTTGCATATTGGAGCAGCACTATTGATGTGGCAAGCATAGGAGACCTTTGGACTTTTGCAGTTGTTATCTTGGTTAATTTACACTTGGCCATGGATGTTGTGAGATGGTATTGGGTGACTCATGCTTCCATTTGGGGGTCTATTGTTGCAACTTTCATTGCTGTCATGATCATTGATGCTATACCCTCACTTCCTGGTTACTGGGCCTTCTTCCATGTTGCTGGCAGTAGATTGTTCTGGTTGTTGTTGCTGGGAATTGTGATAACAGCATTGCTTCCTCGTTTGTTTGTGAAATTTCTGTATCAATATTGTTTTCCTAATGATATTCAAATATCTAGAGAAGCTGAGAAGATAGGGCATCGGAGATTTGTTGAAAGTGGGCACATAGAAATGCTTCCTGTCTCAGATACTCAACCAAGATGGTAG 3642 0.4198 MGTSKRPLLLPSPRTPNQQDFPTIPVFSELSKSKSSSSNTVTFSGVDTSNPVEKNSSNSSPSMSIHSERSNSVKEVSFLPSGSKRLPVRYGSSKGGGGDSGRLSMSQRELSDEDARIVCIDDPEKTNETVQFAGNSIRTAKYSILTFIPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDGYEDWRRHQSDKVENNRLASVLVNGEFVEKKWTDIRVGEIIKINVNEAIPCDIVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETGSKVPGKDSLNGLIKCEKPNRNIYGFHGNMEVDGKKLSLGSSNIVLRGCELKNTIWAIGVAVYCGSETKAMLNSSGAPSKRSRLETRMNSEIIMLSFFLVALCTVTSVCAAVWLKRHKDELNLLPYYRKLDVSEGENDTYKYYGWGFEILFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIRDNRMYDEATNARFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSTKDEEVENSVQVDGKILRPKMKVKVNLELLRLARSGVGNMEGKRIRDFFLALATCNTIVPIVVDTPDPDVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGERQKFNVLGLHEFDSDRKRMSVILGNPDNSVKLFVKGADTTMLSVRDKSSNTDLIKATENHLHSFSSLGLRTLVIGMRELNALEFEEWHAAYEAASTALFGRSALLRKISNNVENNVCILGASAIEDKLQQGVPEAIESLRTAGIHVWVLTGDKQETAISIGYSSKLLTNNMTQIVINSNNRESSRKKLQDALALSKKFTNTTGGNSDANSNQIALIIDGGSLVHILDSEFEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVPLLLVHGHWNYQRLGYMILYNFYRNAVLVFVLFWYVLYTAFTLTTAINEWSSTLYSIIYSALPTIIVGILDKDLGKRTLLKYPQLYGAGQRDEAYNKRLFVWTMADTLWQSIVIFWAPLFAYWSSTIDVASIGDLWTFAVVILVNLHLAMDVVRWYWVTHASIWGSIVATFIAVMIIDAIPSLPGYWAFFHVAGSRLFWLLLLGIVITALLPRLFVKFLYQYCFPNDIQISREAEKIGHRRFVESGHIEMLPVSDTQPRW* 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4286 1213 MobiDBLite consensus disorder prediction 1 72 - -
Lja3g4286 1213 Gene3D - 754 951 IPR023214 -
Lja3g4286 1213 SFLD Haloacid Dehalogenase 486 962 - -
Lja3g4286 1213 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9 1212 - -
Lja3g4286 1213 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 434 532 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja3g4286 1213 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 882 997 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lja3g4286 1213 CDD P-type_ATPase_APLT_Dnf-like 134 1071 - -
Lja3g4286 1213 Pfam Phospholipid-translocating ATPase N-terminal 120 183 IPR032631 -
Lja3g4286 1213 Pfam Phospholipid-translocating P-type ATPase C-terminal 939 1179 IPR032630 -
Lja3g4286 1213 Pfam Cation transport ATPase (P-type) 601 681 - -
Lja3g4286 1213 SFLD p-type atpase 486 962 IPR044492 -
Lja3g4286 1213 PRINTS Sodium/potassium-transporting ATPase signature 495 516 - -
Lja3g4286 1213 PRINTS Sodium/potassium-transporting ATPase signature 988 1008 - -
Lja3g4286 1213 MobiDBLite consensus disorder prediction 10 72 - -
Lja3g4286 1213 SUPERFAMILY Calcium ATPase, transduction domain A 215 356 IPR008250 -
Lja3g4286 1213 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 132 1186 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lja3g4286 1213 Gene3D - 190 359 - -
Lja3g4286 1213 ProSitePatterns E1-E2 ATPases phosphorylation site. 504 510 IPR018303 -
Lja3g4286 1213 Pfam E1-E2 ATPase 218 460 - -
Lja3g4286 1213 SUPERFAMILY HAD-like 489 952 IPR036412 -
Lja3g4286 1213 PRINTS P-type cation-transporting ATPase superfamily signature 502 516 - -
Lja3g4286 1213 PRINTS P-type cation-transporting ATPase superfamily signature 911 930 - -
Lja3g4286 1213 Gene3D - 603 735 IPR023299 GO:0000166
Lja3g4286 1213 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 9 1212 - -
Lja3g4286 1213 MobiDBLite consensus disorder prediction 84 107 - -
Lja3g4286 1213 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 508 770 IPR023299 GO:0000166
Lja3g4286 1213 SUPERFAMILY Calcium ATPase, transmembrane domain M 131 1178 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4286 Lja-Chr3 82850284 82856185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4286 67 1212 Primary Pumps ATPases AT5G04930 68.316 0.0 1650
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4286 3 82850284 82856185 Lja3g4286 3 82850284 82856185 ECH