Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4283 ATGGCGGAGGTAATCAACTTGCCACCCGAATCTCTCGATCGATCTCCCTCCGCTTCCGCTCCTCCGCCGCCACCGGCGGCTCCACCTGCTCCTATTCCTCCTACCTCATCCTCCGCTGCCGATGACGATCTCCCGCCGCCTCCTCCCCCTCGCCGGAGGGACCGCCGTGACGACCGTGATTTCGACCGCCCCCGCGGCGGCCGGGATTACTACGACCGTGATAGGGACTTCAAGCGCCGCCGCAGCCCTAGCCCTGGCTACCGCGATCGCCGCCATTCCCCTCCCCGACGTTCACCGCCTCCGTATAAGCGATCTAGAAGGGGCAGCCCCCGCGGTTATGGACCCGATGACAGGTTTGGACATAATTACTCTGGTGGCTATGAACGGGGAGTGGGTGGAAGGACTGGTTACGCAAATGAAAGGTCGTATGGCAGGTTTGGACATCGATCTGCTGGGGGATTTCAAAATGGAAATTCTGATGTGGATATGAATCGTGGTTATTCAGATTTGCCAAGTGGAGGTGCACAAAGAGAGGGGTTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAAGATGATGTACTGCCTGCTGAAGCTGAGCGTAGGTATCAAGAGTACAAATCAGAGTATATTTCTACTCAAAAACGAGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTTGAAAGACAAGTATCATCCAACAAATTTACTTACAGTGATTGAAAGGAGGAATGAAAATGCACGACGAGTGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACATTAGACCTGAATCCTGGGTTAAACTCTTCTCCACCCAATAAATCAGGGCAGGCCAGCGAGGGAAATTCAGAGGAGGAAACAGATGCTAGTGGTAAACGAAGAAGACATGGTAGGGGATCCAATAACGATAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTATTAGTTCTGAGGCTAGACGCATCCAAGCAGATATTCAACAGGCTCAGGCTGTTGTTCGTAAGCTTGACATCGAAAAGGGGATTGAAGACAATATTTTATACACCAGTGATCAAAGTAAAAATGATGATAAGGCTCACAGTGGGTCTGTGGGCCCCATAGTAATTATCCGGGGCCTAGCATCTGTTAAGGGCTTGGAGGGTGTTGAGCTACTGGACACTCTTATTACATATCTTTGGCGGATTCATGGTATTGATTATTATGGAATGGTGGAGACTAATGAGGCTAAAGGTTTTAGGCATGTGAGACCAGATGGAACCGGGCACGAAGAAGCAAGTAAATCAGGGCCAGAATGGGAGAAAAAACTTGATTCATTTTGGCAGGGAAGGTTGAATGGTCAGGATCCCTTGGATGTAATGACTGCTAAGGAAAAGATAGATGCTGCAGCGACCGATTTTTTGGATCCACATGTTAGAAAAATAAGAGATGAAAAGTATGGATGGAAGTATGGTTGCGGAGCTAAGGGCTGCACAAAACTTTTTCATGCATCTGAGTTTGTGCATAAACATCTGAAGCTAAAACATCCAGAGCTTTTGATGGAACTAACGGCAAAATTGCGGGAAGATCTTTATTTTCAAAATTACATGAATGATTCTAATGCACCTGGTGGAACGCCTATCATGCAGCAACCTCAGAAGGACAGGACTCTAAAGCGTAGATTGCTTGATGCCCGATTGAAAGATGATAGGGGTAGTCGACGAGACATGGATAAGAGTGATAGAATAAATGGAGATAGGCCTGACAATTCTCCATCCCGGGAAAGGCAACGGGGAAACCATGATGAAGGCGAAGCAATGTATGATTCATATGGAGGGCCTGCTGTACCTCCATTTACCTCAGATATGCCCCCTCCTCCACCAGTTTTGATGCCTGTACCTGGTGCTGGGCCTTTGGGACCCTTTGTTCCTGCTCCACCAGAGGTTGCAATGCAGATGTTTAGGGATCAAGGAGGTCCATCTTCATATGATCCATCCGGAATGAACATGCGATCCGGTCCTCACATGGGTGGACCTGCACCAATAATGGCTGTTCCTCCAGGATTTAGACCTGATCCGCGACGAATGCGAAGTTATCAAGATTTGGATGCCCCAGAAGACGAAGTCACTGTGATAGACTATCGGAGCTTGTAG 2139 0.4811 MAEVINLPPESLDRSPSASAPPPPPAAPPAPIPPTSSSAADDDLPPPPPPRRRDRRDDRDFDRPRGGRDYYDRDRDFKRRRSPSPGYRDRRHSPPRRSPPPYKRSRRGSPRGYGPDDRFGHNYSGGYERGVGGRTGYANERSYGRFGHRSAGGFQNGNSDVDMNRGYSDLPSGGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARRVAKDFLLDLQSGTLDLNPGLNSSPPNKSGQASEGNSEEETDASGKRRRHGRGSNNDNDFSAAPKAHPISSEARRIQADIQQAQAVVRKLDIEKGIEDNILYTSDQSKNDDKAHSGSVGPIVIIRGLASVKGLEGVELLDTLITYLWRIHGIDYYGMVETNEAKGFRHVRPDGTGHEEASKSGPEWEKKLDSFWQGRLNGQDPLDVMTAKEKIDAAATDFLDPHVRKIRDEKYGWKYGCGAKGCTKLFHASEFVHKHLKLKHPELLMELTAKLREDLYFQNYMNDSNAPGGTPIMQQPQKDRTLKRRLLDARLKDDRGSRRDMDKSDRINGDRPDNSPSRERQRGNHDEGEAMYDSYGGPAVPPFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMFRDQGGPSSYDPSGMNMRSGPHMGGPAPIMAVPPGFRPDPRRMRSYQDLDAPEDEVTVIDYRSL* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4283 712 MobiDBLite consensus disorder prediction 1 163 - -
Lja3g4283 712 MobiDBLite consensus disorder prediction 265 323 - -
Lja3g4283 712 MobiDBLite consensus disorder prediction 533 610 - -
Lja3g4283 712 MobiDBLite consensus disorder prediction 15 45 - -
Lja3g4283 712 Pfam SERRATE/Ars2, N-terminal domain 184 266 IPR021933 -
Lja3g4283 712 MobiDBLite consensus disorder prediction 46 96 - -
Lja3g4283 712 MobiDBLite consensus disorder prediction 549 600 - -
Lja3g4283 712 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 712 - -
Lja3g4283 712 Coils Coil 322 342 - -
Lja3g4283 712 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 712 IPR039727 GO:0006397
Lja3g4283 712 ProSitePatterns Zinc finger C2H2 type domain signature. 488 511 IPR013087 -
Lja3g4283 712 MobiDBLite consensus disorder prediction 265 287 - -
Lja3g4283 712 Pfam Arsenite-resistance protein 2 430 609 IPR007042 -
Lja3g4283 712 MobiDBLite consensus disorder prediction 652 699 - -
Lja3g4283 712 MobiDBLite consensus disorder prediction 533 548 - -
Lja3g4283 712 MobiDBLite consensus disorder prediction 288 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4283 Lja-Chr3 82828103 82837530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4283 48 712 C2H2 Transcription Factor Family AT2G27100 61.192 0.0 733