Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4261 ATGAGTACAGAACCTCAGACGGTAGTGGTGATCCAGGATGCATCAAGAGAAGTTAGTTTAAAGGCAATCCTAAAGGCCCTGACAAAATTATCAGTTAAAGCTGGGGATCAGCTTATCATTGTTGCTATTCTTGATTGGCTTAGCAGTCCCATGGGTTACATGATCAGCGTAGACTCTAGTTCATTCGTTGCAACAAACCAGAAAATCATTGATGAAAACCATACCAGGAGAAAAGAAGACTATCGCGTGAACCGGCGCATGCATAAGCTCACTGAGTACTGTAAAATGAATGAGATTGAATTCCAATTGGAAGTGCTTGTAGGCCCGGCTGCACAGAAAATTCTTGAGGCTGCAAGAAAATTTCATCCAACAAGTTTGATACTTGATAGACAGATGCACAAGGATAAGAAGTATTTCATAGACCAGATCCCTTGTGGTATGTACAGGATAACAAGTGATAACTCCCTTGAAAAGTTGAAGGATCCGATACTAACAGCCATCAAACCTGAAGAAAGGCTAGAAAATATGCGCTATTCACAAATGATACCAGGAAGCGAAGAGGAAGCAACTTCTCTTCAGAGTAAGTATTTGCTTAAATGGTTAAGTAGTACAACTGAGGATGACAAATGGTACATTAAAGTGTCCAGGTCTGCATCAAGTGATCAATTGACATCAAAAGGAAAACTAGTGGACTACCAGCACGGAAGCAACAATGAAATATCTCAAATGCAGGAAGTATTTATAAATCCAGTTTGTTCTTTATGCAAGAATCGGCGACCAAAAATTGGATGGAAGAAAGACTTCACTTACACAGAACTCTACACTGCTACACAGGGATTTTCTGCCAAGAACTTTCTGTCAGAAGGTGGGTTTGGATCTGTCTATAAGGGACAGCTGAATGGAATGACAATCGCTGTTAAGCAACATAAAAGTGCAAGTTCCCAAGGAGAGAAGGAATTTAAGTCTGAAGTTTATGTACTTAGCAAGGCAAGACATGAGAATGTGGTTATGCTGCTAGGTTCATGCTCAGAAGGAAATAATAGGCTTCTTGTTTATGAATATGTCTGCAATGGCTCACTTGACCAACATCTATCAGAACACTCTCGAGCACCTCTTACTTGGGAAGATAGGATCAAGGTAGCTATAGGAGCTGCCAAAGGCTTACTATACTTGCACAAGAATAACATAATCCACAGAGATGTGAGACCAAACAATATCCTAGTAACACATGATCATCAACCAATGTTGGGAGACTTTGGATTAGCAAGAAATCATAATCAAGACATAACACACTCAACAGAAGTTGTTGGAACTTGGGGGTATTTGGCACCGGAATATGCAGAATATGGCAAAGTGTCAACTAGAACAGATGTATATTCGTTTGGGGTGGTACTACTACAGCTTATAACTGGAATGAGGACTACAGACAAAAGACTAGGAGGAAGAAGTCTTGTGGGATGGGCAAGGCCACTTTTAAGAGAGAGGAATTATCCAGATCTGATTGATGAAAGGATCTTTAACACTAATGATTTCCATCAGCTATTTTGGATGGTCCGAATAGCAGAGAAATGTCTAAGCAAGGACCCTAAGAAGAGACTAAATATGGCTGCGGTTGTTAATGCTTTGACTGACATTGAGAAAGGCAACACATGTGATATCCGAGTGAGAGACTACTCACCTGCAAGGTCATATTCATCCTATAGCGAATCAGAAATTGATGAATCTGAAGATGAAATGCAAGTACTTTTCGAGTGTGAAGCTGAATTACAAAGCAACAGTTCAGAATCCACGACAAGTAATAGCATAATTCAGATGGAGCATATGCTTGTAAGACAGCCACCATCCCCTCCATTTCAGAGCATCTCTTCAAGTAGCTCAAGCTCAATGAAGATTTATGCGGAACCAACTGGTGATTGTGAAGCACTGGATGAAGAGAATACAGAAATATCAGAATGCCAAGTGGAGTTACTCAATTCTTAG 1980 0.403 MSTEPQTVVVIQDASREVSLKAILKALTKLSVKAGDQLIIVAILDWLSSPMGYMISVDSSSFVATNQKIIDENHTRRKEDYRVNRRMHKLTEYCKMNEIEFQLEVLVGPAAQKILEAARKFHPTSLILDRQMHKDKKYFIDQIPCGMYRITSDNSLEKLKDPILTAIKPEERLENMRYSQMIPGSEEEATSLQSKYLLKWLSSTTEDDKWYIKVSRSASSDQLTSKGKLVDYQHGSNNEISQMQEVFINPVCSLCKNRRPKIGWKKDFTYTELYTATQGFSAKNFLSEGGFGSVYKGQLNGMTIAVKQHKSASSQGEKEFKSEVYVLSKARHENVVMLLGSCSEGNNRLLVYEYVCNGSLDQHLSEHSRAPLTWEDRIKVAIGAAKGLLYLHKNNIIHRDVRPNNILVTHDHQPMLGDFGLARNHNQDITHSTEVVGTWGYLAPEYAEYGKVSTRTDVYSFGVVLLQLITGMRTTDKRLGGRSLVGWARPLLRERNYPDLIDERIFNTNDFHQLFWMVRIAEKCLSKDPKKRLNMAAVVNALTDIEKGNTCDIRVRDYSPARSYSSYSESEIDESEDEMQVLFECEAELQSNSSESTTSNSIIQMEHMLVRQPPSPPFQSISSSSSSSMKIYAEPTGDCEALDEENTEISECQVELLNS* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4261 659 MobiDBLite consensus disorder prediction 615 632 - -
Lja3g4261 659 PANTHER OS01G0253100 PROTEIN 17 571 IPR045271 GO:0004714|GO:0006468
Lja3g4261 659 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 571 - -
Lja3g4261 659 SMART tyrkin_6 280 542 IPR020635 GO:0004713|GO:0006468
Lja3g4261 659 ProSiteProfiles Protein kinase domain profile. 280 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4261 659 ProSitePatterns Tyrosine protein kinases specific active-site signature. 396 408 IPR008266 GO:0004672|GO:0006468
Lja3g4261 659 Gene3D HUPs 1 143 IPR014729 -
Lja3g4261 659 SUPERFAMILY Protein kinase-like (PK-like) 264 542 IPR011009 -
Lja3g4261 659 Pfam Protein tyrosine and serine/threonine kinase 283 542 IPR001245 GO:0004672|GO:0006468
Lja3g4261 659 Gene3D Transferase(Phosphotransferase) domain 1 355 560 - -
Lja3g4261 659 Gene3D Phosphorylase Kinase; domain 1 253 354 - -
Lja3g4261 659 MobiDBLite consensus disorder prediction 612 647 - -
Lja3g4261 659 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4261 Lja-Chr3 82541275 82546905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4261 268 549 Trihelix Transcription Factor Family AT1G70460 47.157 9.91e-78 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lja3g4261 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4261 - - gmx:100794450 831.247