Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4245 ATGAACAACGACCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCCAACCACTTTCTTCGGTCTTCTTCTTCTTCACTCCTCCAAATGCAACAACATCACTCTCTCTGAAGTCTTCACCGACTTCGCCACCAGAGAATTCAATGCATTCCTCTGGTACGCTCTCATTGTCACCACCACGCTTCTGCTCAGAAAACTCTTCAAACTCTTGTCCTTGTGGCAACTCGCTAGAACCCTTCCTGGACCTCCCTCTCCCTCTTTCTTTGCCCACCACCGCTACCTCGTTTCCCGGCAAAACTTTACTGATGTGTTGTCAAAATTCCATGAGAAGTATGGACCGATTGTTAAGCTATGGCTTGGTCCTACTCAGCTTCTGGTGTCAGTCAAGGATCCAATGTTAATTCAAGAGATGCTTACAAAGGCTGAGGATAAATTGCCTTTTACTGGAAAAGTATTACATCTAGCCTTTGGGCAATCAAGCCTCTTTGCTCCTTCCTTTGAAAAGGCTAAAAAAAGAAGGGAATTATTGGCAACAGAGTTGAATGAAAGATTGCTAGGGACTGCTGATCTGATGCCTATGAAGGTTGCTGACTTTATCGTAGATAAGATAGAAAACACCAGGGTCAGAGGAAGTATTGGTTGTAGATTGGTTTCCCAGCATATGGCTTTCACCTTAATGGGAGCCACATTCTTTGGAGATGGCTTCTTGGCCTGGCCAAAGGCTGCAATGTATGAGGAACTTCTTACAATGATTGGTAAAGATGCTTGCTTTTGGGCCTCATATAATGTTACTCCTTTCTGGAAACAAGGATTTTGGAGGTATCAACGCTTATGTAATAAGTTAAGATGCTTAACTCAGGACATGCTTCAACATTGCAGAAAAAGCTGCAAGATATTTGGCCATACTGATGAAAATGTTCATAGTGAAAGTTCAAACCTAGACATGAAATCAGCAGATGGTGCACAATGTTGTTCTGATAATGAGTTCCATAATTACTATTTTTCTCACGACCTTAATGGTCACCAAAATGCTGATGATGAAACCTGTGGGAACATCATGCGTGTTATGTTTCATGGATGTCAAACTACAGCTGCTTTAATTGCGAATGTATTGACTAATCTTGTGACGCATCTGGAACTACAAGATAAGGTTTATTCAGAGATTAGCATGATTGGAAGAAACCCATCAAAATATAAGCATGAAGATGTTTATAGGATGCCATTGCTATTGGCTACAGTTTATGAATCTGCGCGCCTGCTCCCCATTGGTCCAATGCTGCAGAGGTGTTCTTTGAAACACGACTTAAGTTTTGCAAGTGGCGTAACCATACCTGCTGGAGCGATGCTTGTTGTGCCTGTTCAATTGGTACAGAAGGATGACTCCAGTTGGGGGAGTGATGCATGTGATTTTAATCCACACCGATTTCTATCAAATGATACAAAAGGATTAGGTTCAGCTGAACTAAACAATCCAAATGAAAATGTAGCGTTTCTTCCTTTTGGATCTGGTACACGAGCTTGTGTTGGGCAGAAATTTGTTATCCAAATTGTTGCCACATTGTTGGCATCACTGCTAGAAACTTATGAGATAAGGCTCAACTCAGGCTCGGATGATGACCCAAAACCAATCTTGAAGAATCATGTTCTTCAGCATCATCCTGATTCACCAATATTGTTTGTGAGAAGAGACCAGTGA 1704 0.4161 MNNDPSSSSSSSSSSSSLPTTFFGLLLLHSSKCNNITLSEVFTDFATREFNAFLWYALIVTTTLLLRKLFKLLSLWQLARTLPGPPSPSFFAHHRYLVSRQNFTDVLSKFHEKYGPIVKLWLGPTQLLVSVKDPMLIQEMLTKAEDKLPFTGKVLHLAFGQSSLFAPSFEKAKKRRELLATELNERLLGTADLMPMKVADFIVDKIENTRVRGSIGCRLVSQHMAFTLMGATFFGDGFLAWPKAAMYEELLTMIGKDACFWASYNVTPFWKQGFWRYQRLCNKLRCLTQDMLQHCRKSCKIFGHTDENVHSESSNLDMKSADGAQCCSDNEFHNYYFSHDLNGHQNADDETCGNIMRVMFHGCQTTAALIANVLTNLVTHLELQDKVYSEISMIGRNPSKYKHEDVYRMPLLLATVYESARLLPIGPMLQRCSLKHDLSFASGVTIPAGAMLVVPVQLVQKDDSSWGSDACDFNPHRFLSNDTKGLGSAELNNPNENVAFLPFGSGTRACVGQKFVIQIVATLLASLLETYEIRLNSGSDDDPKPILKNHVLQHHPDSPILFVRRDQ* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4245 567 PANTHER CYTOCHROME P450 FAMILY 4 55 537 - -
Lja3g4245 567 SUPERFAMILY Cytochrome P450 80 565 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4245 567 Pfam Cytochrome P450 83 554 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4245 567 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 503 512 IPR017972 GO:0005506|GO:0016705
Lja3g4245 567 PRINTS P450 superfamily signature 361 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4245 567 PRINTS P450 superfamily signature 510 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4245 567 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4245 567 PRINTS P450 superfamily signature 501 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4245 567 PANTHER CYTOCHROME P450 4C3-RELATED 55 537 - -
Lja3g4245 567 PRINTS E-class P450 group I signature 413 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4245 567 PRINTS E-class P450 group I signature 370 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4245 567 PRINTS E-class P450 group I signature 456 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4245 567 PRINTS E-class P450 group I signature 111 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4245 567 PRINTS E-class P450 group I signature 500 510 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4245 567 PRINTS E-class P450 group I signature 510 533 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4245 567 Gene3D Cytochrome P450 76 556 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4245 Lja-Chr3 82355097 82369226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4245 42 532 Cytochrome P450 AT1G13710 23.782 1.51e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4245 - - gmx:100809563 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4245 3 82355097 82369226 Lja3g4245 3 82355097 82369226 ECH