Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4241 ATGGCCTCTGAAAAGCTCAAATGTTGTGCAAACTTCCTTGAGAACTCGAAACACTACTTTGCCATGATCGCTTTGCAGTTCGGCTATGCAGGCATGAACATCATCACTAAGGTTTCCCTCAACCGAGGCATGAGCCACTATGTTCTCGTTGTTTACCGCCACGCCTTCGCGACTGCTGCCATCGCTCCATTCGCCTTATTCATTGAAAGGAAAGCTCAGCCAAAGATAACATTTCGGATCTTCATGCAAATTTTCATCCTAGCTTTGCTTGGGCCTGTGATAGATCAAAACTTCTACTATGCTGGGCTGAAACTCACATCCCCAACATTCTCTTGTGCAATGAGCAACATGCTTCCTGCCATGACTTTTGTGATGGCCTTTTTATGCAGGATGGAAAAGATCGACATGAAGAAGGTGAGATGCCAAGCAAAAGTAGTGGGAACCATGATAACTGTGGCTGGTGCAATGTTGATGACCTTGTACAAAGGCCCTCTTTTGGAGATGGCATGGGCCAAACATGCACCTCATGATCAACATAGTGAAACCAATAATGGTACAAACACCACAAGATCCTCAGACAAGGATTGGTTCTTAGGCTCCATGTTACTCATCATTGCCACTCTTGCTTGGGCATCCCTCTTTGTTTTACAAGCCAAAGTCATAGAAACGTACAAGAATCATCAGCTAAGCCTCACATCACTAATCTGCTTCATAGGCACGCTTCAAGCTATTGCTGTTACTTTTGTCATGGAACGCAAGCCTTCTGTGTGGACTATTGGCTGGGATATGAACTTACTAGCCGCTGCATATGCTGGAATTGTGACATCAAGCATATCATATTACGTACAAGGGTTGGTAATTAGGAAGAAAGGGCCTGTTTTCGCTACTGCATTTAGTCCTCTAATGATGATCATTGTAGCCATCATGGGTTCCTTTATCCTTGCAGAGCAAATATTTCTTGGAGGGATAATTGGCTCCATCTTGATTGTCATAGGCTTATACTCTGTTCTGTGGGGAAAGCACAAAGAACAAGTGGAGACCAAAGTGGGTGAGGATATAGCCTTGCCTGTAAAAAGTGGTCAGTTTAATGGAAATCAAGGGACACCTGTTGATTCCACTGATCAATGTTGTGATGAAGCAAAATCAAATGAGAAAGTAGAAGCCAACAAGAACTCATCAATTGTCATTAGCATGTCTGCGGCCGAATAA 1209 0.4359 MASEKLKCCANFLENSKHYFAMIALQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALFIERKAQPKITFRIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAFLCRMEKIDMKKVRCQAKVVGTMITVAGAMLMTLYKGPLLEMAWAKHAPHDQHSETNNGTNTTRSSDKDWFLGSMLLIIATLAWASLFVLQAKVIETYKNHQLSLTSLICFIGTLQAIAVTFVMERKPSVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVIRKKGPVFATAFSPLMMIIVAIMGSFILAEQIFLGGIIGSILIVIGLYSVLWGKHKEQVETKVGEDIALPVKSGQFNGNQGTPVDSTDQCCDEAKSNEKVEANKNSSIVISMSAAE* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4241 402 Pfam EamA-like transporter family 198 337 IPR000620 GO:0016020|GO:0016021
Lja3g4241 402 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020|GO:0016021
Lja3g4241 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Lja3g4241 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 342 - -
Lja3g4241 402 PANTHER WAT1-RELATED PROTEIN 12 376 - -
Lja3g4241 402 PANTHER WAT1-RELATED PROTEIN 12 376 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4241 Lja-Chr3 82329092 82332163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4241 1 402 Nodulin-like Gene Family AT5G07050 64.951 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4241 - - gmx:100804359 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4241 3 82329092 82332163 Lja3g4241 3 82329092 82332163 ECH