Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4239 ATGGTCCATAAGAAGCTAGTGGACGACGTGTCGGGGGGGCTCAAAATCTATGACGACGGTTCAGTAGACCGGACATGGACCGGACCTCCCGAGGTCAAGTTCTTGATTGAACCGGTGCCTCCCCACCAACAATTCATTGAGGGAGTTGCCATTCGTGATGTAACCACCACCCATGATGGTTCAGGCAACCGCATCAGGTTGTACATGCCAGAGAAAACATCGGATGATAAACACAAGCTACCCATACTCCTTCACTTCCATGGAGGCGGGTTTTGTATTAGTGAACCAGATTATTACATGTATTACCAGATCTATACTCGGTTAGTCCGGTCCACTCGTTCCATCTGTGTATCCCCATTCCTTCGTCGCGCCCCGGAGAACCGCCTCCCTGCTGCGATTGACGACGCGTTTGCAGCTCTTCAGTGGCTTCAATCTATTGCCAAAGGCGAATCACGTGAGTCGTGGCTCGAGCAGCACGGGGACTTCGACCGGGTTTTTCTCATAGGTGATAGCTCCGGAGGAAACCTCGTCCATGAAATGTCAGCGAGGGCCGGTTCTGCGGACCTGAGCCCGGTCCGGCTGGCAGGAGGTATTCCCATTCATCCCGGTTTTGTCCGGTCAAACCGAAGCCGGTCTGAGATAGAAATGCTGGAGTCATCGTTTCTGACGTTGGATATGCTGGACAAGTTCTTGAGCTATGCGCTGCCGTTAGGGAGCAATAAGGACCACCCCATCACGTGTCCCATGGGTGCGGCGGCACCACCGCTTGAGGGGCTGAAACTGCCGCCTTTTCTGCTGTGCATGGCAGAGATGGATTTGGTGTGGGACACGGAGATGGAGTATTATGAAGCCATGAAGAAGGCTAATAAAGATGTGGAGCTGTATGTGAGTAAGGGAATGACACACAGTTTCTATCTGAACAAAATTGCTGTGGATGCGGACCCTATTACTAGTGCCCAAACTGATGCTCTCATTGCTAGGGTCAAAGAGTTCATCGACATGCACTGA 1008 0.5208 MVHKKLVDDVSGGLKIYDDGSVDRTWTGPPEVKFLIEPVPPHQQFIEGVAIRDVTTTHDGSGNRIRLYMPEKTSDDKHKLPILLHFHGGGFCISEPDYYMYYQIYTRLVRSTRSICVSPFLRRAPENRLPAAIDDAFAALQWLQSIAKGESRESWLEQHGDFDRVFLIGDSSGGNLVHEMSARAGSADLSPVRLAGGIPIHPGFVRSNRSRSEIEMLESSFLTLDMLDKFLSYALPLGSNKDHPITCPMGAAAPPLEGLKLPPFLLCMAEMDLVWDTEMEYYEAMKKANKDVELYVSKGMTHSFYLNKIAVDADPITSAQTDALIARVKEFIDMH* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4239 335 Pfam alpha/beta hydrolase fold 83 305 IPR013094 GO:0016787
Lja3g4239 335 PANTHER ARYLACETAMIDE DEACETYLASE 3 333 - -
Lja3g4239 335 SUPERFAMILY alpha/beta-Hydrolases 6 333 IPR029058 -
Lja3g4239 335 Gene3D alpha/beta hydrolase 7 333 IPR029058 -
Lja3g4239 335 PANTHER CELL DEATH ASSOCIATED PROTEIN 3 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4239 Lja-Chr3 82223321 82224864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4239 3 332 Carbohydrate Esterase AT5G16080 32.047 1.08e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4239 - - lja:Lj0g3v0229819.1 608.216