Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4217 ATGACGATGAAGCAGAATAACTCCAAGTCTAAGCTGAAAGGTAAAGTTGTTGTTGTTGATGATGATGACTTCCCCATGGATGAAACTGAAGTGCGAATTCAAATTCTTGAAAAGGAGAACTGCTCCAAGTCTAAGCTCAATGGAAAAGTTGTTGTTGATGATGATGATGATGACTTCCCCATGGATGAAACTGATCAAGTGCTTCAGATTCTTGAAAAGAAGAACTGCTCCAACGAAGGGACATCAACTTCAACGGACCGCAAGTGTAATTACGGCCGCAAAGGGGCACCAACTTCAACGTACCGCAAGTGCAATTACGGCCGCAAAGGGACATCAACGTCAACGGACCGCAAGTGCAATTATGGTCGCGAAGGGGCATCAACTTCAATGGACCGCAAGTGCAATTATGGCCGTGAAGGGGCATCAACGTCAACGGACCGCAAGTGCAATTACGGTCGCGAAGGGCCATCAACGTCAAGGAACCGCAAGTGCAATTATGACCGCGAAGGGGCATCAACGTCAACAAACCGCAAGTGCAATTACGCCCGCAACGTAACTGATTTTGAAGTCCCTGCAATAATTTCCCAATCCCACTTACGGTCGTTTCAACAAGCATTTGTCCGCAATTTCGCACCTCAATTGCAACCAAACCCTCCAAATTTGCCGCCGGTTCCAAGCCTACGAGATTATATTTTGGGGTGTAGCAGACCTATTGAAAAGGAATTGCAAGAGAGCGACGTGAATCCGGACCAAAATAGGCTACTCCTAAACAAGAATCAAGTGGAGAATTTCTTTCTGCCATTGTTGATGAATGATGAAAATCTAAAGGATGGAATTGCAGTCACCGGGTATGATATGGATGGCAAAGAGCACCCCTTGGCATTCAAGAAATGGGCAGATAAGTACTATGTCTTTTGTAAAGGGTGGAAAACTTTCTTCCAAAGGCAAGGATTGAAGCCTGGCGATTTTGTCACCGTATGGATGTTTCGTCATTCTAAAACTAATCGTTTGTGTGTCGCTCTTGGTATTAGGAAAGGATCAAACATAGATGCAGTTCCATAA 1062 0.4492 MTMKQNNSKSKLKGKVVVVDDDDFPMDETEVRIQILEKENCSKSKLNGKVVVDDDDDDFPMDETDQVLQILEKKNCSNEGTSTSTDRKCNYGRKGAPTSTYRKCNYGRKGTSTSTDRKCNYGREGASTSMDRKCNYGREGASTSTDRKCNYGREGPSTSRNRKCNYDREGASTSTNRKCNYARNVTDFEVPAIISQSHLRSFQQAFVRNFAPQLQPNPPNLPPVPSLRDYILGCSRPIEKELQESDVNPDQNRLLLNKNQVENFFLPLLMNDENLKDGIAVTGYDMDGKEHPLAFKKWADKYYVFCKGWKTFFQRQGLKPGDFVTVWMFRHSKTNRLCVALGIRKGSNIDAVP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4217 353 MobiDBLite consensus disorder prediction 145 159 - -
Lja3g4217 353 ProSiteProfiles B3 DNA-binding domain profile. 239 345 IPR003340 GO:0003677
Lja3g4217 353 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 215 345 IPR005508 GO:0003677
Lja3g4217 353 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 215 345 - -
Lja3g4217 353 SUPERFAMILY DNA-binding pseudobarrel domain 238 335 IPR015300 -
Lja3g4217 353 CDD B3_DNA 238 339 IPR003340 GO:0003677
Lja3g4217 353 MobiDBLite consensus disorder prediction 145 171 - -
Lja3g4217 353 Gene3D - 233 351 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4217 235 347 B3 DNA Binding Superfamily AT4G03170 49.565 6.74e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4217 - - gmx:121174747 141.354