Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4214 ATGTATGGGAGAAAAGCTTGCCAACTTGTCAAAGAACTCGCTGGCGGAGAAAAGGGCCAGTTCACGCCGTTTAATAGTGACTTGTTTGAACAAGTAGTGGCAGAGTGCAGTCAACATCACCTTGAGCTTCAGTCCTTAATAAGGAAGATACAGGACGAAGGTTTGGATGTCCAAACAGCTAGAAATGCAGACCACTACGGAGCCCTCATCCACCATCTTTCTTTAGTCCGAAATAAACGTTGCCTAATGGCCTATACGTACAATCGAGCAGAAAATTTACGGAGCTTGGTATGGAAGGTAGGACATGGGCTTCCTCAGGAAATTGAAGAAAAGATTTGTCATTCAGAGAAGGAATATTTTAAGAAGCATTCTTCTGCATTGAAATCTTATATGTCACAACTGCTGGTTGATCTCACTGTGGATATGGTACCTCCAAAAGATCCTTGCATCCAAGTAAGGGTCCTTGAAGACATAGGAGAAGGCATTGTACTTAGTGATGATAAGACTTACAATTTGGCCTTACAATCAATACACCTTCTGAAACGAACTGATGCAGAGCAATTTATCGCAAGGGGCTTAATGGAGGAGATCACGGATTGA 600 0.425 MYGRKACQLVKELAGGEKGQFTPFNSDLFEQVVAECSQHHLELQSLIRKIQDEGLDVQTARNADHYGALIHHLSLVRNKRCLMAYTYNRAENLRSLVWKVGHGLPQEIEEKICHSEKEYFKKHSSALKSYMSQLLVDLTVDMVPPKDPCIQVRVLEDIGEGIVLSDDKTYNLALQSIHLLKRTDAEQFIARGLMEEITD* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4214 199 Gene3D - 1 134 - -
Lja3g4214 199 Pfam GINS complex protein 45 117 IPR021151 -
Lja3g4214 199 CDD GINS_A_psf1 3 134 IPR005339 GO:0000811|GO:0006260
Lja3g4214 199 PANTHER PARTNER OF SLD5 1 195 IPR005339 GO:0000811|GO:0006260
Lja3g4214 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4214 1 198 Core DNA Replication Machinery Family AT1G80190 66.667 3.79e-96 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4214 K10732 - qsu:112021696 323.939