LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja3g4185	ATGGGTATGGCTGCAGAGACACAGTTTCATGTTTTGGCTGTTGATGATAGTCTTATTGACAGAATGTTGATTGAGAGGCTCCTCAAAACCTCTTCTTTTCATGTTACTGCAGTTGATTCTGGTAGCAGGGCTTTGAAGTTTCTTGGCTTGCTTGAAGATGAGCAGAAGAAACACGAGCCTCCAGTTTCTATTGCTCCAGAAACTCAACAGGATGCAGAAGTGAACCTGATCATAACTGATTACTGTATGCCAGGAATGACAGGCTATGATCTGTTGAGAAAGATCAAGGAATCTAAATCTCTTAAGGATATACCAGTTGTGATTATGTCCTCAGAGAATGTCCCATCAAGGATCAACAGATGCTTAGAAGAAGGAGCTGAAGAATTCTTTCTGAAGCCAGTTCAACAGGCAGATGTGAACAAACTCAGGCCCCATTTGCTGAAATCAAAAGTAAAAGATGAGGCTGATGAATTCACTAACAACAAAAAAATGGTTACAGAATAA	504	0.4028	MGMAAETQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSRALKFLGLLEDEQKKHEPPVSIAPETQQDAEVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQADVNKLRPHLLKSKVKDEADEFTNNKKMVTE*	168

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja3g4185	167	Coils	Coil	148	167	-	-
	Lja3g4185	167	PANTHER	TWO-COMPONENT RESPONSE REGULATOR	2	165	IPR045279	GO:0009736
	Lja3g4185	167	SMART	REC_2	9	143	IPR001789	GO:0000160
	Lja3g4185	167	Pfam	Response regulator receiver domain	11	139	IPR001789	GO:0000160
	Lja3g4185	167	ProSiteProfiles	Response regulatory domain profile.	10	147	IPR001789	GO:0000160
	Lja3g4185	167	SUPERFAMILY	CheY-like	8	141	IPR011006	-
	Lja3g4185	167	CDD	REC_typeA_ARR	11	142	-	-
	Lja3g4185	167	PANTHER	RESPONSE REGULATOR ARR8, PUTATIVE-RELATED	2	165	-	-
	Lja3g4185	167	Gene3D	-	10	165	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja3g4185	Lja-Chr3	81656925	81658847	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja3g4185	1	154	Response Regulator Gene Family	AT3G57040	70.130	4.28e-77	228

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Lja3g4185		Response_reg	1.4e-19	CL0304

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja3g4185	K14492		-	gmx:100818762	271.552