Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4184 ATGGAAGCCATTGCTTGTCTTATCTTGGAAAAACTGAGCTCTTCAGCTATCAAAGAGTTTGGAATCATTTGGAATCTCAAAGATGATCTACAAAGAATGAAGAACACAGTCTCTGCAATAAAAGCTGTGCTCCGTGACGCCGAGGCCAAGGCCACCACTAACCATCAAACTAGTAATTGGCTGGAGGAGCTGAAAGATGTACTCTATGATGCAGATGACTTACTTGATGATCTGTCTACAGAAGATTTGAAGAGGCAAGTGATGATTGGAAATAAGTTTGTGAGAAAGCTACAAATCTTCTTCTCAAAATCAAACCAAATTGCCCATGGTCTTAAATTAGGCCATAACATGAAAGCAATTCAGAAGAGGCTTCATGATATTGCTAATAATAAACAGGCACTGCAATTGAGTGACCACCCTGTGGAGACTCCAACTGCATATAGGGAACAAAGACAAACTTACTCTTTTGTGAGTAAGGATGAAGTCATTGGGAGAGAGGATGAAAAGACACTCCTTACAAGCTATTTACTACACAACAGTGTGACAGATGATGTTTCTGTGATTCCAATTGTTGGGATTGGAGGATTAGGTAAGACAACACTTGCTCAACTTGTTTATAATGACAATGCTTTCCAAGACTATTTTGAGCAAAAGATGTGGGTGTATGTCTCAGATGAATTTGACATTAGGAAAATAGCTCAGAAGATGATTGGGCAGGGTGAGAATAGTGAGATTGAGCAAGTGCAGCAAGACCTCAGAAACAAAATTCAAAGGAAGAAATATTTTCTTGTGTTGGACGATGTGTGGAACGAGGATCGTGAACTGTGGCTTAAATTGAAGAGCTTGCTCATGGAAGGTGCAAAGGGAAGCATGATAATTGTAACGACACGGAGTCAGACAGTAGCGAAAATAATGGGCACACATCCACCCCTTTTCTTAAAAGGTTTGGATTCACAAAGATCTTGGAAGCTATTCTCTCGAGTGGCATTCAGTGAGGGAAAAGAACCAAATGATTTGGAGTTGTTGGCCATAGGAAGGGACATTGTTAAAAAATGTGCTGGCATTCCTCTTGCAATAAGAACTATTGGTAGCCTCTTGTATTCTCGAAATTTAGGCAGCAGTGATTGGCTATATTTCAGGGATGTTGAGTTTTCAAGGATAGAGCAGCACAAGGACAAAATCTTTGCAATCCTTAAACTGAGTTATGACCATCTTCCCTCATTTATGAAAAACTGTTTTGCTTATTGTTCATTGTTTCCTAAAGGCTTCGAGTTTGAGAAGAAAACACTCATTCAGTTATGGGTAGCTGAGGGATTCATTCAACCAGGAAATGACATTAGATGTGTAGAAGAGGTTGGTCATGAGTACTTCATGAATCTGCTGTCAATGTCATTCTTCCAAGATGTCACTATGGAGGATTGGGGTGATGTAAGTACTTGCAAAATGCATGACCTAATGCATGATCTAGCACAATTAGTGGTTGGAAAAGAATATGCTGTGGTTGATGGAAAAGAAGCAAACATAGGAAACAGAATACGTTATTTGTCTTCTCATACCGTGTTGCATTTTTCACAGACAACATCCTCTTCCTACAAGTTAAGGACATATCTCGTGCTAAGTCAACAAATTCATGCTAGAAATTGTTTGGATCAGTTGTATTTTGATTCTCTTCTAGGCCTAAAGTGCTTGCGAGTGTTAACACTTAGCGGACCAGGTGTTTTCGCAATTCCAAAAATTTTTAAAGAGTTGAAGCATTTGAGATATGTCGATCTTTCAAGGAATAGAGCGCTTCAAATTCTTCCACGGGTCATTACTAGTCTACATCACCTGCAAACTCTAAAACTTTCTGAATGTCCTGATCTCACAGAATTACCAGAAGATATCAATAAAAGTCTCAGGCATCTTGAGTTGAATGGTTGTGAGGGATTGAAATGTATGCCGCGCGGGTTGGGACAGTTGACCAATCTTCAAACACTAACACATTTTGTGTTGGACCGCAGAAGCACAAGATGCAGCAGTGTAAATGACTTGAGTGGACTAAACAACCTTAGAGGGAGATTAGAAATCAAATGGTTGGATTCCCTGCGCTATAATGCTGGGGAGGTTGAGTGTGCCAAGGTTCTTCTTGAGAAGAAACATCTACAAGAATTGGAGCTGCGGTGGTGGTATGATGTGGAGGTTAGACCAAGTCCATTATTTCGGGAGGTTCTTGATTTAGACAGTGGGTCGGAAATATCAAAACCAGAAGTAAACAACAACTGGTTGGAAGATGAGATGATCTTACAAGGATTGCAGCCACATCACTCGCTTAAAAAACTAGTAATAGATGGATTTTGTGGGAAAAGGTTACCAGACTGGATAGGGAATCTCTCATCGCTCGCGAGTCTTGAAATCCGTAATTGCGGTGGTTTGAAATTGCTACCTGATGGAATGCATAACCTCATGTCTTTAAAGAAATTATGCATATATAACTGCTCACTGTTAGAGAAAAGATGTGCAAGACCATATGGTGAAGACTGGCCTAAAATTGCTTGCATCCCAAAAGTTGTGATCTCTCCCATGTCACCGTCCGCTATGAAGTATTTTACTTGA 2592 0.4008 MEAIACLILEKLSSSAIKEFGIIWNLKDDLQRMKNTVSAIKAVLRDAEAKATTNHQTSNWLEELKDVLYDADDLLDDLSTEDLKRQVMIGNKFVRKLQIFFSKSNQIAHGLKLGHNMKAIQKRLHDIANNKQALQLSDHPVETPTAYREQRQTYSFVSKDEVIGREDEKTLLTSYLLHNSVTDDVSVIPIVGIGGLGKTTLAQLVYNDNAFQDYFEQKMWVYVSDEFDIRKIAQKMIGQGENSEIEQVQQDLRNKIQRKKYFLVLDDVWNEDRELWLKLKSLLMEGAKGSMIIVTTRSQTVAKIMGTHPPLFLKGLDSQRSWKLFSRVAFSEGKEPNDLELLAIGRDIVKKCAGIPLAIRTIGSLLYSRNLGSSDWLYFRDVEFSRIEQHKDKIFAILKLSYDHLPSFMKNCFAYCSLFPKGFEFEKKTLIQLWVAEGFIQPGNDIRCVEEVGHEYFMNLLSMSFFQDVTMEDWGDVSTCKMHDLMHDLAQLVVGKEYAVVDGKEANIGNRIRYLSSHTVLHFSQTTSSSYKLRTYLVLSQQIHARNCLDQLYFDSLLGLKCLRVLTLSGPGVFAIPKIFKELKHLRYVDLSRNRALQILPRVITSLHHLQTLKLSECPDLTELPEDINKSLRHLELNGCEGLKCMPRGLGQLTNLQTLTHFVLDRRSTRCSSVNDLSGLNNLRGRLEIKWLDSLRYNAGEVECAKVLLEKKHLQELELRWWYDVEVRPSPLFREVLDLDSGSEISKPEVNNNWLEDEMILQGLQPHHSLKKLVIDGFCGKRLPDWIGNLSSLASLEIRNCGGLKLLPDGMHNLMSLKKLCIYNCSLLEKRCARPYGEDWPKIACIPKVVISPMSPSAMKYFT* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4184 863 Coils Coil 61 81 - -
Lja3g4184 863 PANTHER OS08G0543100 PROTEIN 19 835 - -
Lja3g4184 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 416 IPR027417 -
Lja3g4184 863 Gene3D - 146 308 IPR027417 -
Lja3g4184 863 PANTHER DISEASE RESISTANCE PROTEIN RP 19 835 IPR044974 GO:0006952
Lja3g4184 863 Gene3D - 402 492 IPR036388 -
Lja3g4184 863 Pfam Rx N-terminal domain 8 94 IPR041118 -
Lja3g4184 863 SUPERFAMILY L domain-like 481 828 - -
Lja3g4184 863 Gene3D - 315 401 IPR042197 -
Lja3g4184 863 Gene3D - 5 118 - -
Lja3g4184 863 Pfam NB-ARC domain 183 403 IPR002182 GO:0043531
Lja3g4184 863 PRINTS Disease resistance protein signature 352 366 - -
Lja3g4184 863 PRINTS Disease resistance protein signature 581 597 - -
Lja3g4184 863 PRINTS Disease resistance protein signature 187 202 - -
Lja3g4184 863 PRINTS Disease resistance protein signature 255 269 - -
Lja3g4184 863 Coils Coil 30 50 - -
Lja3g4184 863 Gene3D Ribonuclease Inhibitor 517 834 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4184 Lja-Chr3 81650382 81653705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4184 184 829 WRKY Transcription Factor Family AT5G45050 22.475 7.63e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4184 - - ccaj:109809163 1166.76