Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4175 ATGCCGGATGTTCATGTTCTTGTTAACGATTTTGTCAATCAGCTCAAAAAGCGTAAAATTGAAGGTTCACAGGCCACAGCAAAGCAGACAGCAGAGTTGCTTCGGTCTGTGATTTCGCAGCAGCGGTTGGCGCAGACGAACCAGGCTACGGCTCTAATTAATGCAGTAAGGGCTGTGGGGGAGAAGCTTATTGCTGCTAATCCTGTTGAGCTAGCTGTGGGGAATATTGTGAGGCGTGTTTTGCACATTATAAGAGAGGAGGATCTTTCTCTTGCTACAGCTGCAATAGCTGGTTTGGGGCTATCAGGTGTAAGTGATGATGAAGATGATGTGGAGCGAGGTGATCATCCTGTTTTATCTGCTGCTGCTGTTGCAGCTGCGGCAAGAAGTACCTTGCGTCCACCATCATTGCAAACTCTGCTAGAGGATATGCCTGAAACAGCCGCTATTCCACACACATCTTCCTCAGGGGGTGATTCGGAAGGGAAAAGTAGATCTGTTGATAAAAGTTCAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCCGTTAATGAACTTATTCAAGACATTTCCAGTTGCTATGAGCAAATAGCTGAGCAAGCAGTAGAGCACATTCATCAGAATGAGGTAATATTGACACTAGGCAGTTCAAAGACAGTGTTGGAATTTCTTTATGCTGCAAAGGAAAAAAAGAGATCGTTTAAGGTCTTTGTTGCTGAAGGTGCTCCAAGATATCAGGGACATCTCCTTGCGAAGGAATTGGCTGCTAAAGGATTACAGACCACAGTAATCACGGATTCTGCTGTTTTTGCCATGATTTCCAGAGTAAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGTATTGTTGCCCCAGTTGGCTTAAACATGGTTGCCCTGGCAGCTCAGAGGCATGCTGTTCCTTTTGTTGTTCTCGCAGGGAGTCACAAGTTGTGCCCTTTGTATCCGCACAATCCTGAAGTGCTATTGAATGAGCTGCGATCACCATCTGAGCTACTTGACTTTGGGGATTTCTCAGATTGCTTGGATTCTGCAAGCGGCGCTGGTTCGCTTCATGTCGTTAATCCAACATTTGATTATGTTCCACCAAAACTTGTCAGTCTATTCATCACAGACAAGGGAGGGCATAACCCATCATATATGTACCGGCTCATAGCAGATTACTACTCATCTGATGATTTGGTGGTGAAACAAAGACGTGCTACAGGGAGTTGA 1248 0.4527 MPDVHVLVNDFVNQLKKRKIEGSQATAKQTAELLRSVISQQRLAQTNQATALINAVRAVGEKLIAANPVELAVGNIVRRVLHIIREEDLSLATAAIAGLGLSGVSDDEDDVERGDHPVLSAAAVAAAARSTLRPPSLQTLLEDMPETAAIPHTSSSGGDSEGKSRSVDKSSRGRKLKHDVIEAVNELIQDISSCYEQIAEQAVEHIHQNEVILTLGSSKTVLEFLYAAKEKKRSFKVFVAEGAPRYQGHLLAKELAAKGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGIVAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGDFSDCLDSASGAGSLHVVNPTFDYVPPKLVSLFITDKGGHNPSYMYRLIADYYSSDDLVVKQRRATGS* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4175 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 55 407 - -
Lja3g4175 415 Gene3D - 194 399 IPR042529 -
Lja3g4175 415 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237
Lja3g4175 415 MobiDBLite consensus disorder prediction 149 173 - -
Lja3g4175 415 SUPERFAMILY NagB/RpiA/CoA transferase-like 5 404 IPR037171 -
Lja3g4175 415 PANTHER BNAA01G32370D PROTEIN 55 407 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4175 1 407 Eukaryotic Initiation Factors Gene Family AT3G07300 80.440 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4175 K03754 - gmx:100778545 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4175 3 81447694 81455197 Lja3g4175 3 81447694 81455197 ECH