Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4159 ATGGTTCAAAGAAAGGTAACAAGCAAGCTTGGTATCCAAGCTGAACATGTTAAATCAGATAAGCTCTTGGGAAACCTGAAGCTATATTCTTCTCATCAACACCAAGAAGGCAAAGCTAGAGGAGCTGATATGAAGAAGAAAATGAAGAAATCAAGGCCTAACTCTATCAAGCTTTCTGATCTTGAGGCTCTTCAAACATCAACATCACCACCTTCAAGGAGAAGCTTATCCCAACCAGGAAAGCCACCGACACCTCTTCATGTTCCAAAAATTGCAGCATCAGCATCAACATCACCACAGAAGCTGCAGCCTTTGGTGAGAACAACAGATGCTTCAGGTTCACCTAACTACATGAAGCCCACAAGCAGTTCACATGCAAAAAAGGAGCTTTTCCTGGTGAGCCATAGAAAAACTCAAACTGGTTCTGATTTTAAGAATCTGAAAAGAAAATTGTGTAGTGATTCAAAAGATACTTGTGTCTCTAGTAAAAAGACTGCAAAAACATTGACAAGATCATCTAGTTTGAAATTGGTGAGAACATTGACAAAGACTACTAGTTTCAAGGCTTATAGATCTTGTCCTAGGAAATCCACCAGAGCTGCTATGTGTGCAGACATGAGTGCAGATGCAGCCCATAGAGCTACCTGTTCTTCAACTTTGAAAGACTCAAAGTTCCCTGCATACCTCATGCTTAGTCCTGGGGGAACAGAGTCAGAGGGAACTTCAGCCATGAAAGTTTGCCCATATACATATTGCTCTCTTAATGGTCATCATCTTGCTGATTTGCCTCCATTGAAAAGCTTCATGTCAGCAAGGAGGCACGTTTTGAAGACCCAGAAGCGCATGAAGCTTGAAGCTCTAAGCCCTCGGAGATTGAAGGTTTCAAGTGAAAAAGGGAAGAAGGAGGAGTCTGATATTGAGCAGAATGTCTTTGATGCAAAACCTGCAGCTGATGAAATTGGCATGGATGTCTTTATTGAAATCTATGCTAAAGAAAAGGATGAAAATTCAAGAGGAGAAGAAGAAATGGGGAGAATAGACTACCTTAAGGAGATTGAGGATCAAGAAGATGTCAATTCCACAATTCAAGATATGAATATCATGCAATTTACTACAACTCCAAGCTTAACTGAAACTCCTTCTCCTCCTGAGTTTAAGATTGATCTGGAGGAGGATATGAAAACAATCTTTGATGATGCTGCAGTTGAAGTAGATGTAAAAGAGGGCTTTCCCCAAGAGAAAAATTTAGAAGAAGCAGATGAAGATCATGAAGAAATAAGCATGGGAAGTTACTGCAGTGATGAGGAACACATGGGGGGTTTTGATATGGGTGATTCTGATTCCAAATCCGACAGTATGGAATGGGACAAGCAAATATTTTGTGGATTTGATCATGAAGAGGATGCTGATTCTGACTCTTCTGTATCCACAGAGGAGGATCTTGACTCAGAAGATGAGTCCTCATCAGAGAGTTCTCATGATATGTCAGTGACATGGTTAGATGATATCCTTAGCAACTATTATGAGGTCATTCTGTTTGATGAAACACTCAAACAAGCCAAATCAGAAGAAAGCTCCTATTATGAATCACAACCTCATCATGGTGCTGATTCTACCCTTGAGGACACAGATGGAAGCACTGAGGCTCAAGAAACTTGTTCCCCCTCCAGTGACATGGGTTATGACCAATCTCCTTTAACAGAGGAAATACTCAAGTACCTAAAAAATGCTGAAGAAAATGCTGGGCAATGCAACAACAAACATGTGGAAGGCGAGGCGGAAATCGATCATAGCCAAGCTCAAAAGGTGAATGAAACTTGTGAAATCAATGAGACCAGCAAAGAGAACAACAATGATGACTACAGCAGCAATAGTGAGGAGAACCAACTTGATGTACCTGAAGAAAGCATCATAGTTGTTCAAGATCAAAACAAAGCTAACAAGTTCAAAAGGAAAACTTGCATAAATGCTGAAGATCAAAACACAAGTGATAATGGGAGAGCTTTAATTAGGAGGAAGAAGCACATTGATGATGATGATGATGAAATGAGAAAGTTCAATCCTAGAGATCCCAATTTCTTACCCTTGGTTCCTGAACCAGGAGCAGAGAAGGTTGATCTGAGGCATCAAATGATGGATGAGAGGAAGAATGCAGAGGAATGGATGCTTGATTGTGCGCTGAGACAGGTTGTGGATAAACTTGCTCCTGCTAGGAAGAAGAAGGTGGCACTGCTTGTTGAAGCTTTTGAAGCAGTGATGCCAAATCCCAAATGTGATACCCGTTTGAGGAACAGTTCAGGGTTTGCTCATGGTGGACGCATTCAAGCTTGTAGCTGA 2337 0.4108 MVQRKVTSKLGIQAEHVKSDKLLGNLKLYSSHQHQEGKARGADMKKKMKKSRPNSIKLSDLEALQTSTSPPSRRSLSQPGKPPTPLHVPKIAASASTSPQKLQPLVRTTDASGSPNYMKPTSSSHAKKELFLVSHRKTQTGSDFKNLKRKLCSDSKDTCVSSKKTAKTLTRSSSLKLVRTLTKTTSFKAYRSCPRKSTRAAMCADMSADAAHRATCSSTLKDSKFPAYLMLSPGGTESEGTSAMKVCPYTYCSLNGHHLADLPPLKSFMSARRHVLKTQKRMKLEALSPRRLKVSSEKGKKEESDIEQNVFDAKPAADEIGMDVFIEIYAKEKDENSRGEEEMGRIDYLKEIEDQEDVNSTIQDMNIMQFTTTPSLTETPSPPEFKIDLEEDMKTIFDDAAVEVDVKEGFPQEKNLEEADEDHEEISMGSYCSDEEHMGGFDMGDSDSKSDSMEWDKQIFCGFDHEEDADSDSSVSTEEDLDSEDESSSESSHDMSVTWLDDILSNYYEVILFDETLKQAKSEESSYYESQPHHGADSTLEDTDGSTEAQETCSPSSDMGYDQSPLTEEILKYLKNAEENAGQCNNKHVEGEAEIDHSQAQKVNETCEINETSKENNNDDYSSNSEENQLDVPEESIIVVQDQNKANKFKRKTCINAEDQNTSDNGRALIRRKKHIDDDDDEMRKFNPRDPNFLPLVPEPGAEKVDLRHQMMDERKNAEEWMLDCALRQVVDKLAPARKKKVALLVEAFEAVMPNPKCDTRLRNSSGFAHGGRIQACS* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4159 778 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 778 - -
Lja3g4159 778 Pfam Plant calmodulin-binding domain 647 754 IPR012417 GO:0005516
Lja3g4159 778 MobiDBLite consensus disorder prediction 58 75 - -
Lja3g4159 778 SMART CaM_binding_2 643 754 IPR012417 GO:0005516
Lja3g4159 778 MobiDBLite consensus disorder prediction 542 563 - -
Lja3g4159 778 MobiDBLite consensus disorder prediction 432 452 - -
Lja3g4159 778 MobiDBLite consensus disorder prediction 438 452 - -
Lja3g4159 778 MobiDBLite consensus disorder prediction 31 128 - -
Lja3g4159 778 Coils Coil 574 594 - -
Lja3g4159 778 MobiDBLite consensus disorder prediction 523 563 - -
Lja3g4159 778 MobiDBLite consensus disorder prediction 465 494 - -
Lja3g4159 778 MobiDBLite consensus disorder prediction 523 541 - -
Lja3g4159 778 MobiDBLite consensus disorder prediction 616 631 - -
Lja3g4159 778 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 778 IPR044681 GO:0005516
Lja3g4159 778 MobiDBLite consensus disorder prediction 471 487 - -
Lja3g4159 778 MobiDBLite consensus disorder prediction 91 123 - -
Lja3g4159 778 MobiDBLite consensus disorder prediction 612 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4159 Lja-Chr3 81291115 81294807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4159 637 778 Calmodulin-binding Proteins AT2G38800 42.958 1.35e-28 120