Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4136 ATGGCCAAGGGCTGGTTTAGCATGGTGAAGAGGCTCTTTATATGGGATACACATTCCACACAAGAGAAGAAGGAGAAAAGAAGGAAGTGGATATTTGGGAGAGTAAAGAACAAGAGATTGGCTACAATTGAAGCCCCACCACCATCAAAAGAAACAAGACTGAGTGAAGCTGAGGAAAAACACAGCAAGCATGCTTTGAAAGTGGCTATTGCCTCTGCTGCTGCTGCTGAAGCTGCTATTACTGCTGCTCATGTTGCTGTTGAGGTTGTTAGGCTCCAATCTGCACACCAATGTAGGGACAAGTCAGAAGAGTTTGAAAATGTTAAAACTTGGCATGAGGCTTCTCAATTCACATACAATTTCCAGAGGAAGATTGAAGAATCCTCAGCCATCAAAATTCAAACAACATTTAGAGGTTACCTAGCAAGGAAAGCTTTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGCAGAGCTGTTAGACGCCACACTATTAGTACTCTGAAGAGCTTGCAGTCCATAGTAAATATCCAGTCCCAGGTCTTTGCAAGAAATCTCCAAATGGTTGGAGGAAGATTGGATTGTGGTGAAAATGAAGAGATGCAGGATTCAAGAGACAAGATAATAAAGATAGACTCCAACAGTGAGAGAAGGTGGGATGACAGTATTTTATTGAAGAAGGAGGTGGATGCCTCTAGCATACACAAGAAAGAAGCTGTGCATAAGAGAGACAGGATAAAAGAATACTCTTATAACCATAGAAGGTCAGCTGAATCAGAAAGAAATAAAGTAAATGGAAGATGGAGATACTGGATGGAAGATTGGGTCGACACCCAACTTTCCAAGAGTAAAGAACTTGAAGATTTAGAATCGGTTTTCAGCTCACATTCTAGAGCTGGTGAGGAATGTGGAAGAAGATCACAACTCAAGCTAAGACATGTTCAGAGAACAAATCAAGTTGAAGGTTTGGATTCTCCAATACTTTCTTCAAGGAATCGCTCATTTCCAAGTTCTCCTGCATTTCCTACATACATGGCTGCAACAAAATCAGCACAAGCAAAAGTGAGATCCGCAAGCTCTCCAAAAGTGAGGATAGGAGGGAATTTGGACATGAACTCTGATTGCTATTCTCCATGCAACAGAAAGCTATCTATTGTTTCTTCCATTAACCATGAAGTTCTCAATTATGGTAGGACAAGCAAGCTTAGCAATAATCAGCAAAGATCTCCTAACTTAAAGGGTCTTTCAAGGCCTTTAAAATCAAGCCAGAATATTAAAGATCTCAGTATTAATTCAGACTTCTCAACTCACAATTGA 1329 0.4056 MAKGWFSMVKRLFIWDTHSTQEKKEKRRKWIFGRVKNKRLATIEAPPPSKETRLSEAEEKHSKHALKVAIASAAAAEAAITAAHVAVEVVRLQSAHQCRDKSEEFENVKTWHEASQFTYNFQRKIEESSAIKIQTTFRGYLARKALRALKGIVKLQAIIRGRAVRRHTISTLKSLQSIVNIQSQVFARNLQMVGGRLDCGENEEMQDSRDKIIKIDSNSERRWDDSILLKKEVDASSIHKKEAVHKRDRIKEYSYNHRRSAESERNKVNGRWRYWMEDWVDTQLSKSKELEDLESVFSSHSRAGEECGRRSQLKLRHVQRTNQVEGLDSPILSSRNRSFPSSPAFPTYMAATKSAQAKVRSASSPKVRIGGNLDMNSDCYSPCNRKLSIVSSINHEVLNYGRTSKLSNNQQRSPNLKGLSRPLKSSQNIKDLSINSDFSTHN* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4136 442 Pfam Protein of unknown function (DUF4005) 329 417 IPR025064 -
Lja3g4136 442 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Lja3g4136 442 MobiDBLite consensus disorder prediction 403 442 - -
Lja3g4136 442 PANTHER IQ-DOMAIN 11 2 436 - -
Lja3g4136 442 Gene3D - 124 176 - -
Lja3g4136 442 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Lja3g4136 442 PANTHER IQ-DOMAIN 5-RELATED 2 436 - -
Lja3g4136 442 SMART iq_5 148 169 IPR000048 GO:0005515
Lja3g4136 442 SMART iq_5 125 147 IPR000048 GO:0005515
Lja3g4136 442 Pfam IQ calmodulin-binding motif 128 147 IPR000048 GO:0005515
Lja3g4136 442 Pfam IQ calmodulin-binding motif 150 167 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4136 Lja-Chr3 80955987 80959011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4136 3 425 IQD Protein Family AT5G13460 42.166 6.26e-93 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4136 - - gmx:100777067 608.601