Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4130 ATGGATGATGGAAATGCTGCGCTTTCTGATAAGCTTTCAGATAATGTTCTGTTTTCAAATCCAGAGTCATCTAGCAAGTTTCATGCCTCAACATCAGTGAATACAGACACAGTGACTGAATTGTCGTGCACCCATACTCATACTTGCAACCCACCTGGCCCTGATTCTGCTCACACACACACATGTTACCACACACACACCACCCAAGTTTTTGCATCTGAAGAAGATACCAACTCAAAACCAAAAACGGCTTCTGGGAACAGAGAAGCTGTTAGAAAATATAGGGATAAAAAGAAGGCTCACACTGCTTATTTGGAAGAGGAAGTGAAGAAATTGCGTTTGGTGAATCAGCAACTAATGAGGAAGCTACAAGGGCAAGCACTTCTTGAAGCTGAATTGTCAAGGTTGAGGAACACTTTGGCAACTCTAAAAGGCAAAATAGATAGTGAATTGGGTTCTTTCCCTTTTCAGAATAAGTGTAGCTCTTCTACTTTTGTCAAAAGGGATGCTGTTTTTCCATGCTTCCATCAACATGGAGTATCATCATCTAGGGTTAATGTTTGTGCATGTGGAAAATCCATGATGATGCCATGGGAAGGAAACTGTCAACCTGAAATAGTGGATTGTCAAGTGGATACAAATAACATGACCTGCACTGAAGGACAAACTAGGGACACTATGGATAAGTTTATGCCATCTGCATCTCAAGATGGGTAA 717 0.4114 MDDGNAALSDKLSDNVLFSNPESSSKFHASTSVNTDTVTELSCTHTHTCNPPGPDSAHTHTCYHTHTTQVFASEEDTNSKPKTASGNREAVRKYRDKKKAHTAYLEEEVKKLRLVNQQLMRKLQGQALLEAELSRLRNTLATLKGKIDSELGSFPFQNKCSSSTFVKRDAVFPCFHQHGVSSSRVNVCACGKSMMMPWEGNCQPEIVDCQVDTNNMTCTEGQTRDTMDKFMPSASQDG* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4130 238 Gene3D - 85 152 - -
Lja3g4130 238 Pfam Basic region leucine zipper 86 132 IPR004827 GO:0003700|GO:0006355
Lja3g4130 238 PANTHER BASIC LEUCINE ZIPPER 23 1 220 - -
Lja3g4130 238 Coils Coil 126 146 - -
Lja3g4130 238 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 220 - -
Lja3g4130 238 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Lja3g4130 238 CDD bZIP 87 134 - -
Lja3g4130 238 SUPERFAMILY Leucine zipper domain 86 124 IPR046347 GO:0003700|GO:0006355
Lja3g4130 238 MobiDBLite consensus disorder prediction 73 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4130 Lja-Chr3 80842674 80844672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4130 34 232 bZIP Transcription Factor Family AT3G51960 43.204 4.03e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja3g4130 bZIP_2 6.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4130 K25785 - gmx:100527780 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4130 3 80842674 80844672 Lja3g4130 3 80842674 80844672 ECH