Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4103 ATGGATGCAGTTTCAGGGTGGTTCGTGACGGTGGTTATTTGTGGGTTATTGTGGTGGTGGAATGTGCTGTGGTATGTTGTTCCTCTCAGTCTCAGAGGCAAGTTGCCACCAGGAAACATGGGGCTCCCTTTTGTTGGAGACATGATCAGTTTCCTTTGGTACTTCAAATTTCTTCGACGCCCTGATGACTTTATTAATGCTAAGCGACGCAAATATGGCGATGGAGCAGGCATGTTTAGAACTCACCTATTTGGCACACCATCCATTATAGTATACACACCAGCAGTTAGCAAATTTATATTCCGTTCAGAGGATAAGTTCATGCAAGAATGGCCAACTATTGAACTCATGGGTAGAACATCAATGGTGGCTGTTCATGGCAAGGCCCATGCCCGAGTTCGCAGCTTTGTCATGAACGCCATCAACAAGCCGGAGGCTCTCCGCCGCCTTGCCGCTCTTGTCCAACCTCGCATGATCAGTGCTCTTGAATCATGGGCCAAAATGGGTAAAATCAAAGCCCAGTTTGAAACCCAAAAGATGACATTTGAGAACATTTCAAAATCATTTATGAGCATGGAGCCAGGTCCTTTCTTACTTTCCATGGATAAGCTCTACAAAGGCTTGCTTGAAGGAGTGAGAGCCTACCCAATTGACTTTCCTGGTTTTGCTTACCACCGTTCTATTCAGTGCAGAAAGAAGCTTGAGGAAATTTTCTGGACAGAGTTTGATAATAGAAAAAAGGAAAGTTATAAGTTGAAACCAAATAATGATCTGATGGATGGGTTAATGCAAATTGAAGATGCTGAAGGTGACAAATTGAGTGACACAGAGGTGGTAGACAACATTGTCTCACTAGTGGTTGCTGGATATATGTCTACTTCCCTTGTGTCGATGTGGGCTATTTCTCTTCTTGCCAAGTACCCAAATGTGCTCAAAAAGCTAAGGGAAGAGAACATGGCTTTGGAAAAGGGGAGTCCTGGGGATCTTATAACAGCTAATGATGTTTCAAATTTAAAATACACAAACAAGGTCGTTGATGAAGTAATAAGAGTGGCCAATGTTGCAGCATTTGTTTTCAGAAAATCTGTAGAAGAAGCCGAGTATAAAGGTTATAAAATACCAAAGGGGTGGAATGTGCTTGTCTTCATTCGGTACATTCATACCAACCCGGAACACTTTCACGATCCCATGTATTTCAATCCAGAAAGATGGAATGAGCCACTAAAGCCTGGAACTAACCAAGTGTTTGGTGGTGGACAAAGACTATGCCCAGGAAACATGCTTGCCAAAATTCAACTTGCACTTCTGCTTCATCATTTGTCCCTAGGATACAAGTGGGAGCTCCTTAATCCAAACGCGGATACCATTTATCTTTCACATCCAGCTCCATCAGATGGGGTCGAGGTTAACTTCAGCAAATTATGA 1425 0.4302 MDAVSGWFVTVVICGLLWWWNVLWYVVPLSLRGKLPPGNMGLPFVGDMISFLWYFKFLRRPDDFINAKRRKYGDGAGMFRTHLFGTPSIIVYTPAVSKFIFRSEDKFMQEWPTIELMGRTSMVAVHGKAHARVRSFVMNAINKPEALRRLAALVQPRMISALESWAKMGKIKAQFETQKMTFENISKSFMSMEPGPFLLSMDKLYKGLLEGVRAYPIDFPGFAYHRSIQCRKKLEEIFWTEFDNRKKESYKLKPNNDLMDGLMQIEDAEGDKLSDTEVVDNIVSLVVAGYMSTSLVSMWAISLLAKYPNVLKKLREENMALEKGSPGDLITANDVSNLKYTNKVVDEVIRVANVAAFVFRKSVEEAEYKGYKIPKGWNVLVFIRYIHTNPEHFHDPMYFNPERWNEPLKPGTNQVFGGGQRLCPGNMLAKIQLALLLHHLSLGYKWELLNPNADTIYLSHPAPSDGVEVNFSKL* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4103 474 PANTHER CYTOCHROME P450 26 12 467 - -
Lja3g4103 474 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 12 467 - -
Lja3g4103 474 Gene3D Cytochrome P450 30 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4103 474 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4103 474 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4103 474 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4103 474 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4103 474 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4103 474 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4103 474 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4103 474 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4103 474 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4103 474 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4103 474 Pfam Cytochrome P450 48 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4103 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Lja3g4103 474 SUPERFAMILY Cytochrome P450 32 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4103 Lja-Chr3 80460805 80467412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4103 7 473 Cytochrome P450 AT2G32440 34.864 2.18e-99 305